Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2460 ATGACTAATCCCTCGAGTATTGCAAAGGCAAAGTGGGCGACCCTCCCAAACAAACAAGCTCCATTCCTACACAGATTCTCTGAGGGTGGGCTTGGTTGCACATGTTGGATCCATTATACCTCAACCCTAAACCCTTATTATCGAGGAGTAGAGGGTAAGGGAACAGGGAGCTTTGGTAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGGTGCGGCCGCCGCAGCTTTCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTTCCCCGCTGCACGCAAGAGGAAATATAATTGGAGCGTGAAGGCCATCCGCAGAAAGACCACCGGCACCGGCAGGATGAGGTACCTCCGCCACGTGCCTCGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGCATAA 438 0.5434 MTNPSSIAKAKWATLPNKQAPFLHRFSEGGLGCTCWIHYTSTLNPYYRGVEGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2460 145 SUPERFAMILY Zn-binding ribosomal proteins 52 105 IPR011332 GO:0006412
Amo07g2460 145 Hamap 50S ribosomal protein L37e [rpl37e]. 52 103 IPR001569 GO:0003735|GO:0005840|GO:0006412
Amo07g2460 145 PANTHER 60S RIBOSOMAL PROTEIN L37-1-RELATED 48 145 - -
Amo07g2460 145 Pfam Ribosomal protein L37e 53 103 IPR001569 GO:0003735|GO:0005840|GO:0006412
Amo07g2460 145 Gene3D - 52 137 IPR011331 GO:0003735|GO:0005840|GO:0006412
Amo07g2460 145 PANTHER 60S RIBOSOMAL PROTEIN L37 48 145 - -
Amo07g2460 145 ProSitePatterns Ribosomal protein L37e signature. 54 73 IPR018267 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2460 Amo-Chr7 71514047 71515095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2460 53 145 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 89.247 1.36e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2460 K02922 - csv:101221537 175.637