Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2451 ATGATAGAACCATTTTTGCTCCTTAAAAAACATACCCATTCCTCACCACACCATCCAACAACAACAACAACCACCTTCTCAATGGCCGCGGACATGTCCAACACCAACACCAACACCAACAACAACAACAACAACCACCCTTCTCACGCCAAGGATTTCTTCGCTTCCCCAGCTCTCTCCCTTAGCCTTGCTGGCATATTTCGGCATGCTGGGGTGGCGGCGGCGGAGGGCGAGGCTGCAACCTCCAACATGGAAGTGGAGGACGGCGATGAAGGCAGCGGCGGAGGAGGAGGCGCCGGTCACACGGTGGATATCAGCAGCGAGAACTCCGGCCCCACTAGATCGAGATCAGAGGATGACTACTTTGAAGGAGAAGGTGAGCATGAAGATGAAGATATTCTCGGTGATGATAACAATAACAATAACAATAACAAGAACAAGAACAAGAAGAAGAGGAAGAAATATCACAGGCACACCGCTGAGCAGATCAGAGAAATGGAAGCGCTATTCAAAGAGTCGCCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAGCTAGGCCTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGCAGAACCCAAATCAAGGCAATACAAGAGCGACATGAAAACTCATTGTTGAAGACGGAAATAGAGAAACTAAAGGAGAAAAACAAAGGGTTGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGTGTTGCAACCACTAGTACCAGAGACGGTGCCATTCCAACTGAAGAACAACAGCTTCGCATTGAGAATGCCAAACTCAAAGCTGAGATCGAGAAGCTTCGAGGAGCTTTAGGAAAATACGGTGGATCAGGTGGTGGTGGATCAACGTCTCCTTCATGTTCTTCTGGTGCTGCTGGTGGACATGAGCAAGAGAATAGAAGCTCGTTGGACTTTTACACTGGAATCTTCGGAGTTGACAAGTCAAGGATAATGGATACAGTGAACAAGGCTATGGAGGAGCTCATAACCATGGCAACAATGGGGGAACCCTTGTGGCTTCGTAGTGTTGAGACTGGCCGTGAGATACTCAACTACGATGAGTACATCAAACACTTCTCATCCCTTCAAAATTCTTCATCAAACAACACTAACACTACTCCTTCATCATCAAAGAGATCCATTATTGAAGCTTCAAGAGACACTGCCCTTGTCTTTGTTGATCTCCCACGCCTTCTCCAAACTTTCTTAGATGCGAATCAGTGGAAGGAAATGTTTCCATGTTTAGTATCTAAGGCGGCGACTGTGGATGTTATATGCAACGGAGAAGGTTCTAACAGGAATGGTGCAGTGCAACTGATGTTTGCTGAGGTGCAAATGCTAACACCAATGGTGCCCACAAGAGAAGTATATTTTGTCCGCTACTCAAAGCAGTTGAGTTCTGAACAATGGGCTATCATTGATGTATCCATTGACAAAGTAGAAGACAACATTGATGCCTCTCTCGTGAAATGTAGAAAACGCCCATCAGGTTGCATTATTGAGGACAAGTCAAATGGTCATTGCAAGGTGACATGGGTGGAGCACTTGGAATGCCAAAAGAGTCCAGTGCATACAATGTATAGGACTATTGTGAACAGTGGCATGGCCTTTGGCGCAAGGCACTGGATTTCCACTCTCCAACTTCAGTGCGAGCGTCTTGTTTTCTTCATGGCAACCAATGTTCCCATGAAGGATTCAACCGGTGTTGCTACATTGGCTGGGAGGAAAAGCATTCTGAAGTTGGCACAAAGAATGACATGGGGTTTCTGCCATGCAGTTGGTGCATCAAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGATATTAGGATCAGTTCACGGAAGAACTTGAACGATCCTGGTGAACCTCTTGGACTCATACTCTGCGCTGTTTCTTCTGTGTGGTTACCTGTCTCTCCTAACGTCTTGTTTGATTTCTTGAGGGATGAAACTCGCCGCACTGAGTGGGATATAATGTCCAGTGGTGGCTCAGTTCAGTCCATTGCAAATTTGGCCAAAGGACAAGACCGCGGCAATGCGGTAACCATCCAAACAATAAAATCGAAGGAAAATAGTATGTGGGTAGTGCAAGATTGCTGCACCAATGCTTATGAATCAATGGTGGTGTATGCTCCTGTGGACATCACTGGCATTCAATCTGCGATGACAGGTTGCGATTCGAGCAATCTCGCCGTACTTCCGTCGGGATTCTCGATTGTTCCTGATGGGATGGAATCAAGGCCAATGGTGATTACTTCAAGACAAGAGGAGAAGAACACAGAAGGAGGATCCTTGTTCACCATAGCATTTCAGATTCTCACCAATGCATCTCCAACAGCCAAGTTAACCATGGAGTCTGTGGAATCAGTCAACACTCTCTTATCTTGTACTTTGAGAAATATCAGAACAAGTTTACAATGCGAAGATAGTTAA 2472 0.4595 MIEPFLLLKKHTHSSPHHPTTTTTTFSMAADMSNTNTNTNNNNNNHPSHAKDFFASPALSLSLAGIFRHAGVAAAEGEAATSNMEVEDGDEGSGGGGGAGHTVDISSENSGPTRSRSEDDYFEGEGEHEDEDILGDDNNNNNNNKNKNKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLKEKNKGLRETINKACCPNCGVATTSTRDGAIPTEEQQLRIENAKLKAEIEKLRGALGKYGGSGGGGSTSPSCSSGAAGGHEQENRSSLDFYTGIFGVDKSRIMDTVNKAMEELITMATMGEPLWLRSVETGREILNYDEYIKHFSSLQNSSSNNTNTTPSSSKRSIIEASRDTALVFVDLPRLLQTFLDANQWKEMFPCLVSKAATVDVICNGEGSNRNGAVQLMFAEVQMLTPMVPTREVYFVRYSKQLSSEQWAIIDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSPVHTMYRTIVNSGMAFGARHWISTLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWGFCHAVGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSKENSMWVVQDCCTNAYESMVVYAPVDITGIQSAMTGCDSSNLAVLPSGFSIVPDGMESRPMVITSRQEEKNTEGGSLFTIAFQILTNASPTAKLTMESVESVNTLLSCTLRNIRTSLQCEDS* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2451 823 MobiDBLite consensus disorder prediction 78 159 - -
Amo07g2451 823 ProSiteProfiles START domain profile. 320 565 IPR002913 GO:0008289
Amo07g2451 823 CDD homeodomain 156 207 IPR001356 GO:0003677
Amo07g2451 823 SUPERFAMILY Bet v1-like 322 562 - -
Amo07g2451 823 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 821 IPR042160 -
Amo07g2451 823 SMART START_1 329 562 IPR002913 GO:0008289
Amo07g2451 823 Pfam Homeodomain 152 207 IPR001356 GO:0003677
Amo07g2451 823 Gene3D - 137 222 - -
Amo07g2451 823 MobiDBLite consensus disorder prediction 32 51 - -
Amo07g2451 823 CDD START_ArGLABRA2_like 324 561 - -
Amo07g2451 823 SUPERFAMILY Bet v1-like 594 809 - -
Amo07g2451 823 SMART HOX_1 151 213 IPR001356 GO:0003677
Amo07g2451 823 Coils Coil 260 280 - -
Amo07g2451 823 Pfam START domain 332 562 IPR002913 GO:0008289
Amo07g2451 823 MobiDBLite consensus disorder prediction 284 308 - -
Amo07g2451 823 ProSitePatterns 'Homeobox' domain signature. 184 207 IPR017970 GO:0000981|GO:0006355
Amo07g2451 823 MobiDBLite consensus disorder prediction 32 50 - -
Amo07g2451 823 MobiDBLite consensus disorder prediction 289 308 - -
Amo07g2451 823 Gene3D - 388 561 IPR023393 -
Amo07g2451 823 SUPERFAMILY Homeodomain-like 139 210 IPR009057 -
Amo07g2451 823 ProSiteProfiles 'Homeobox' domain profile. 149 209 IPR001356 GO:0003677
Amo07g2451 823 Coils Coil 208 235 - -
Amo07g2451 823 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 53 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2451 Amo-Chr7 71464647 71473681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2451 105 822 Homeobox Transcription Factor Family AT1G79840 62.845 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Amo07g2451 START 1.9e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2451 K09338 - gmx:100809926 1250.34