Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2448 ATGATGGGTGGGAACCCTAACCCTAACTGGTGGAATAATATCCCTCAACATCATCATCATCAGTATGAAGATGACTATTCACACATCAACATGATGAACATGCTAGATTTCACTTATAGCAAGAAGCTACCACCATCACCACCAGCATTATCCTACAAGTGTAATAGTAGTAGAATTAGCACTAACAAGAACAAGAACAAGAAAGGTAGGGTTTCAAGCCAACAACATCTCATCAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATCACATCCCTTCATCAACTTGTTTCTCCATTTGGAAAGACTGACACAGCTTCCGTTCTATTGGAAGCAATTGGATATATAGGATTCCTTCACTCTCAAATTCAGACACTGACCTCTCCTTATTTGGACAACACCAATAATCCAAACTCTGTAACTGTAAGTATAAGTACCCATCATGTTTGGATATATTTCATGACTTGCAAGAGTTTGATTGGATAA 483 0.3851 MMGGNPNPNWWNNIPQHHHHQYEDDYSHINMMNMLDFTYSKKLPPSPPALSYKCNSSRISTNKNKNKKGRVSSQQHLIKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIGFLHSQIQTLTSPYLDNTNNPNSVTVSISTHHVWIYFMTCKSLIG* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2448 160 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 131 - -
Amo07g2448 160 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 118 IPR011598 GO:0046983
Amo07g2448 160 PANTHER OS05G0228400 PROTEIN 7 131 - -
Amo07g2448 160 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 129 IPR036638 GO:0046983
Amo07g2448 160 Gene3D - 61 136 IPR036638 GO:0046983
Amo07g2448 160 CDD bHLH_AtbHLH_like 79 125 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2448 Amo-Chr7 71423347 71424424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2448 46 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 59.140 2.98e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2448 - - ahf:112703662 230.72