Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2399 ATGGAATTCAAAAAGGATGTGCCCAAGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATAATCACTTGCAATAGAGAGGGAAAATGCAAGTCTAGAGTTTCACTAATAGAAAAGACCAACCCTAGAATCAACTACAATTGTCCCGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTCGGATTATATCGAAGGTGTGTTTGGATCATTCACATCCTTGTGATCCAGAGATAGCAAAATTGTTGACACGTAATAGAGAGATGAGTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGATGGGTGAAGCGAGGGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGGTATGAGATCCACGCAACAAACTGAGAGCATGCATTCATATTTTGACAAATTTTTAAATAACAAGAGCTTGTTGATTCAATTTAAGGAGCAACAAGAAAGGGAGGCTGATGTTGAAGACTATAAATCAATAATACCTTGTGCCACTAATTCCTTAATAGAGAAGCAATTTCAAAGTGCCTATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAAATTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGCAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTAATTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCAAAAACAAAGGATATTACATGCAAGTGTCAAATGTTTGAATCAAGAGGCATATTATGCAGTTATAGCTTGGTTGTCCTAGGGAATGAACACGTGAGAGAAATTTCAAGAAGATACATTTTGGACCGTTGGAGTAAACTTGTGAAGCGAAGACATAGTGATATTAAGAGCAGCCATGATCCAAGTTTGTTGAATCTAAAAACAGAGAAGTTTGATGATTTATGCTCCCATTCGAACAATGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGTCGGAGTGTCAAAAGCATATTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATTAGAAGATGGTGGTAAAGATGCATTGTCCATTTTTGTAGGAGGCTGTATAATAAGCATTCAAAATATTAAAAGCCCTCCTTATGTGTCCTCTAAGGGTCGTTCAACAAATAGGCTAAGATCTGAAAAAGACAAGATGATAAAAAAGAAGATCGAGGCAAAGAAGAGGAAAAATTTTAGATGTAGAAACTACTTCCTTAAAAATAATCAACATATTGGAAATAGTCAAAGTCTCCCTTTCAACAAACAGCTTCAAGATGCTAACTACCATGTTAATGAGGGATTTGAATCTGATTCAATGGGAGGATCAATGGGAAGATTCATGTCCTTATTGAATTCAATTCATTCATACAAATTCTCAAATGTCGATTGA 1596 0.3546 MEFKKDVPKVGMCFGTIEDANQFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQIITCNREGKCKSRVSLIEKTNPRINYNCPARISIRLNKEGLRIISKVCLDHSHPCDPEIAKLLTRNREMSMHMCRVIERNDEAGVRPSKTYQVLMGEARDIYEERHRWVPIFLDNFFWAGMRSTQQTESMHSYFDKFLNNKSLLIQFKEQQEREADVEDYKSIIPCATNSLIEKQFQSAYTNAKFKEVQKQIRKKANCILHLMKAVSTSKVYSILEDVSNSKERVYEVNYNAKTKDITCKCQMFESRGILCSYSLVVLGNEHVREISRRYILDRWSKLVKRRHSDIKSSHDPSLLNLKTEKFDDLCSHSNNVAQFASQTKETSDILHRYLDMAMSECQKHIANSSSNANELDNLLTLEDGGKDALSIFVGGCIISIQNIKSPPYVSSKGRSTNRLRSEKDKMIKKKIEAKKRKNFRCRNYFLKNNQHIGNSQSLPFNKQLQDANYHVNEGFESDSMGGSMGRFMSLLNSIHSYKFSNVD* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2399 531 PANTHER OS03G0843700 PROTEIN 5 120 - -
Amo07g2399 531 PANTHER OS03G0843700 PROTEIN 151 395 - -
Amo07g2399 531 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 120 IPR031052 GO:0006355
Amo07g2399 531 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 151 395 IPR031052 GO:0006355
Amo07g2399 531 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2399 Amo-Chr7 71037532 71040670 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g2399 FAR1 3.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2399 - - adu:107459516 650.203