Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2371 ATGAGTTGTTTCTCTCTTCTTTGTGGAAGAAAGGGGTCTTCTTCGGCGGCGCAACCAACCGGAGCTGATATAGATCTTTCTAGCTTTATGAACATCAATCTCTACACATACAAGGAATTGCAGATTGCGACAGAAAATTTTAGTCCTGCAAATAAGATAGGGGAGGGAGGTTTCGGATCGGTATATAAGGGAAAGTTGGGAGATGGTACTCTGGCTGCTATTAAGGTTTTGTCAGCTGAATCTAAACAAGGAGTCAAAGAGTTCTTGACAGAAATCGAGGTGATTTCTAGTATAGAGCATGAGAATCTAGTTAAGTTGTATGGTTGCTGTGTGGAAAGGAACCAGAGGATTTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTGGTGGTGGAGGCCATAGTAGCTTGTACTTAAGCTGGCATACACGGAGGAACATTTGCATCTGCGTTGCGCGTGGTCTTGAATTTCTTCATCATGAAGTTGAGCCACATATTATCCATAGAGACATTAAAGCTAGCAATATATTACTTGACAAAGACTTGCAGCCCAAAATTTCGGATTTCGGTCTAGCAAGGCTTATTCCGGCAAACATTACCCATATTAGTACGCTTGTTGCTGGCACAGCTGGCTATCTAGCACCTGAATATGCGATTCGAAGTCAAGTGACAAGAAAATCAGATGTCTACAGTTTTGGAGTTCTGCTATTAGAAATTGTTAGCGGAAGGTGTAACACAAATAGACGCTTACCTGCAAAAGAAAGGTATCTACACACAAGGGCTTGGGATTTGTATGAGAGGGGGGAGCTGGAGAGTTTGGTTGATTCCTCGCTAGCCGGCGACTTTGATGTCGAGGAGGCGATAAGGTTTTGCAAGATTGGTCTCATTTGCATTCAGGATTCTCTTCAGCTCCGGCCTTCAATGTCTGCTGTGCACGACATGCTGATAGGCAAAACAGATGTCAATGAGAAGATGATGTCAAAACCAGGCTTACTATTTGAGTTTGTGGAAACGAAAGATCAAGGAAAACAGAAAGGCAAGGTTGAAGAAATTGAAGTGGAAAATACATCTTTGATGGCTATGACTAGTTCAGAGAGGAAAGATGATTTGGAAAGTTCATCTTTTTCAGGAAGCACAGGATCTTATGCTACAATGACCTTCACTTCAATTTATGATAGATGA 1191 0.419 MSCFSLLCGRKGSSSAAQPTGADIDLSSFMNINLYTYKELQIATENFSPANKIGEGGFGSVYKGKLGDGTLAAIKVLSAESKQGVKEFLTEIEVISSIEHENLVKLYGCCVERNQRILVYGYLENNSLAQTLGGGGHSSLYLSWHTRRNICICVARGLEFLHHEVEPHIIHRDIKASNILLDKDLQPKISDFGLARLIPANITHISTLVAGTAGYLAPEYAIRSQVTRKSDVYSFGVLLLEIVSGRCNTNRRLPAKERYLHTRAWDLYERGELESLVDSSLAGDFDVEEAIRFCKIGLICIQDSLQLRPSMSAVHDMLIGKTDVNEKMMSKPGLLFEFVETKDQGKQKGKVEEIEVENTSLMAMTSSERKDDLESSSFSGSTGSYATMTFTSIYDR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2371 396 SMART serkin_6 47 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2371 396 ProSiteProfiles Protein kinase domain profile. 47 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2371 396 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Amo07g2371 396 MobiDBLite consensus disorder prediction 365 385 - -
Amo07g2371 396 Gene3D Phosphorylase Kinase; domain 1 21 122 - -
Amo07g2371 396 CDD STKc_IRAK 53 318 - -
Amo07g2371 396 PANTHER RECEPTOR-LIKE KINASE 3 355 - -
Amo07g2371 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Amo07g2371 396 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Amo07g2371 396 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 355 - -
Amo07g2371 396 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Amo07g2371 396 Pfam Protein kinase domain 50 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2371 Amo-Chr7 70597823 70600289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2371 35 380 Receptor kinase-like Gene Family AT1G53430 49.284 3.22e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2371 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2371 - - adu:107459855 769.229