Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2342 ATGCTGCATTGCAGCTGTTGGTTTAGAGCAAAGAAGCTCCTCGAGCAGGCAACATTGTTGAACAGGTCAATAATACACCAAAGCCTTTTTTTTTTTTTTTCTTTTTTTAGCAGATTGTGGTTCAAATTAGAGTGGTCTTGGCATTTGTTGGGGAGAATAGAGCACTGCAAGGTTACTCATCTGCACTGTGGATTGTTCAGCAGCGGCTCCGAAAAGAGCACCGTTGTGTCCCTCATAGAGAGATTCTATGACCGTTTATCAGGACAAGTTTTGCTAGATGGGAATGATGTTAAGAGTTTGAAGCCAAAATGGTTGAGGCAGCAAATAGGACTAGTGAGCCAAGACTGGCTTTGTTTGCGACAACATTCAGAAGCTGACCAAGTTGAGATTGAAGAAGCTGCAAGAGTAGCCAAGTTTATAATTTATTTATTTTATTCTAAAACGATTTTTTTAGTTGAACCACGGTTAGATCGGTTGGATCAATAA 486 0.4012 MLHCSCWFRAKKLLEQATLLNRSIIHQSLFFFFSFFSRLWFKLEWSWHLLGRIEHCKVTHLHCGLFSSGSEKSTVVSLIERFYDRLSGQVLLDGNDVKSLKPKWLRQQIGLVSQDWLCLRQHSEADQVEIEEAARVAKFIIYLFYSKTIFLVEPRLDRLDQ* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2342 161 Pfam ABC transporter 68 132 IPR003439 GO:0005524
Amo07g2342 161 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 67 141 - -
Amo07g2342 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 139 IPR027417 -
Amo07g2342 161 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 67 141 IPR039421 -
Amo07g2342 161 Gene3D - 67 115 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2342 Amo-Chr7 70049680 70050836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2342 67 143 Calmodulin-binding Proteins AT2G36910 65.169 4.37e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2342 K05658 - ahf:112772555 114.39