Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2336 ATGACCCCTTTGGCCTTCTCTCAATTCTATGAAAAATGGTTTGATCTTCTCCATCACCTTGTCAACCAGCTCTCCGACTTTGCTTCTTCCATCGCCAACTCCAAGGAAGAGTATATTTCTCCCTTGGTAGCGGCGAAGCAGGAAGAGAAGTTGGCSCAACTGATTGGCAAAGTGATGTTGCACCATGAGGAGTACTTCAGGGCGAAGTCACTCATCACGGAGAATGACCCCTTAAGCGTGGTGGCTTCTCCGTGGGCCACCACACTTGAGAGGTCTCTTMATTGGGTCACTGGGTGGAGRCCTACTACGGCTTTYCACCTGGTGTACACGGAATCCTCTGTGTTGTTTGAGTCCCACATCGGAGATATTCTCCGTGGTGTGAATACCGGCGACCTTGGTGACCTTTCTCCAACGCAGTTCCGGCGAGTCAGTGAGTTGCAATGTGACACTGTGAAGGAAGAGAATCAAATAACAGATGAGCTTTCAGATTGGCAAGACACTGCGAGTCACTTGATGGGACCACGCGCCGAGAGCAAAGAGAGGATCGAACGGCTGATATGCATCATCAAGAAAGCGGATGATCTACGGCTCAGAACGATGCGCAGCGTGGTTAGGTTGCTGTCGCCGCAGCAGGCGATTGAGTTCCTCATAGCGTCTGCAGAGATGCTCGTGGGGATCCGCGGGTGGGGATCGAATCATGACTGTCCACGTGGCAGATAA 720 0.5153 MTPLAFSQFYEKWFDLLHHLVNQLSDFASSIANSKEEYISPLVAAKQEEKLAQLIGKVMLHHEEYFRAKSLITENDPLSVVASPWATTLERSLXWVTGWRPTTAFHLVYTESSVLFESHIGDILRGVNTGDLGDLSPTQFRRVSELQCDTVKEENQITDELSDWQDTASHLMGPRAESKERIERLICIIKKADDLRLRTMRSVVRLLSPQQAIEFLIASAEMLVGIRGWGSNHDCPRGR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2336 239 ProSiteProfiles DOG1 domain profile. 3 236 IPR025422 GO:0006351|GO:0043565
Amo07g2336 239 Pfam Seed dormancy control 45 110 IPR025422 GO:0006351|GO:0043565
Amo07g2336 239 PANTHER - 5 237 - -
Amo07g2336 239 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2336 Amo-Chr7 69873987 69877030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2336 3 218 bZIP Transcription Factor Family AT5G06950 25.463 2.95e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2336 - - adu:107459966 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1752 18 36736905 36739635 Amo07g2336 07 69873987 69877030 hybridization