Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2313 ATGGAGAACAATAATGAGGTTTCAAAGGCAACAATGATGGAGCAAGAAATAATGAGAGGGCGTGACATGGCAAACCAGTTACTTCAAGTTGTTGTTGATAGTAGAAATGAAGAAGAAATTGAAAGGTCAACGGTGATGCCTTTTGCTGAAGATGCTGTGCGCAAAGTTCTCAGATCATTCACAAACACACTCCTGCTATTGAACAATGAAGACACAAAAGAAATTGCACCAAGCTGGCAGAGTGACAGCTCAATTCTGTGTGAGGATGGCCATGCATGGAGAAAGTACGGACAGAAGAAGACCATCAATTCCAATTACCTCAGGAGCTACTACAAGTGCAGCTACAAGAATGAAAAAGATTGCAAAGCCATCAAACATGTTCAGAGAATCCAAGAGGATCCTCCATTATACCGTACAACCTATTATGGCCATCACACTTGCAAATGCTCTCTCATCACTTACCCACACACAAGACTAGAACCTGCTTCTTCTTTTGAATCTTCTATGTTAYTATCCTTTAGTATAGTGGYTTCTAATGACCGTATTGACCACAACCAATCTTCCTCATCAAATGACTACGATCTCTTAAGTGATTATGAACTTTATTTCAATTATTAG 618 0.3948 MENNNEVSKATMMEQEIMRGRDMANQLLQVVVDSRNEEEIERSTVMPFAEDAVRKVLRSFTNTLLLLNNEDTKEIAPSWQSDSSILCEDGHAWRKYGQKKTINSNYLRSYYKCSYKNEKDCKAIKHVQRIQEDPPLYRTTYYGHHTCKCSLITYPHTRLEPASSFESSMLLSFSIVXSNDRIDHNQSSSSNDYDLLSDYELYFNY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2313 205 Gene3D WRKY domain 73 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g2313 205 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 72 IPR044810 GO:0003700
Amo07g2313 205 Pfam WRKY DNA -binding domain 88 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g2313 205 SMART WRKY_cls 87 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g2313 205 ProSiteProfiles WRKY domain profile. 82 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g2313 205 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 72 - -
Amo07g2313 205 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 72 174 - -
Amo07g2313 205 SUPERFAMILY WRKY DNA-binding domain 84 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g2313 205 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 72 174 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2313 Amo-Chr7 69210568 69214409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2313 71 174 WRKY Transcription Factor Family AT5G22570 42.991 4.05e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo07g2313 WRKY 6.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2313 - - adu:110273813 330.102