Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2297 ATGAACATGATCTCCCCCTTTTCTCTCTTCTTCCTTTTACTTGTTGCTGCCTTTTGCTTTTCCTCTCAAGCTTTTGGAGCTACCCAACTGCCAGAAAATGAAGTGGAAGCTCTGCAAAGCATAGCAAAGACACTTGGGATCAAGAATTGGAATCCTAGCGCTGATGAATGCAATAAGCTGGTGGGACAAAATAATTGGACTTCATGTTCGGAATTCAAAGATGATGAATATCAGAATGTTGTCATCTGCAATAATTGCTCCAGTGACGCCGTTTGTCATGTCACTAATCTATGTATGAAACGACAAAACCTCTCGGGTACACTTCCGCCAGAACTAGTGAGGTTGCCTTACCTTCAAGAAATTGATCTTACTTTCAACTACCTGAATGGCACAATTCCTAGTGAATGGGGATCCATGAATCTTCTCAACATCTCTCTTGGAGGAAATCGGTTAACAGGCCCAATACCAAAAGAGATAACAAACATATCCACTCTCCAAAGTTTTGTTGTGGAGTCCAATCAAATGTATGGAGATCTTCCCCTTGAGCTTGGGAATCTGACACAGATTCAAAGACTGTTACTTTCCTCCAACAATTTTACAGGAGAGCTACCTGCAACACTTGCCAAGCTCACTAACTTGCAGGATATTCGACTTGGGGATAATCAATTCTCTGGAAAGATTCCTGATTTTATCGAAAGTTGGACAAATCTCACAACATTAAATATTATAGGGAGTGGACTAAGTGGGCCAATTCCTTCTGGTATTTCAAAATTGAGAAACTTAACTGACTTGAGAATAAGTGATTTGAATGGATCTGAAATTTCAAGTTTTCCCGAACTTAATACTAGGTCGATGAAATATCTAATTTTAAGGAGTTGCAACATTCATGGAATACTAGAAGATTATCTCTCAACAATGACAATATCACAAATCTTAGATCTCAGCTTTAACAAATTGACTGGACCAATTCCATCTTCCTATCAGGAGTTGACAAAAGTGAATTACATATTTTTAACTGGAAACCTTCTCAATGGATCAGTGCCATCATGGACGAGTGATGCTACCAGTTTAGATCTTTCATATAATAACTTCAACCAAGATTATCAGCAACAATGTCAATCTGGAAATGTGAACTTATTTGCTGCTACCTCTCCGACAATTAACAATTCAGGAATTGTTTCATGTTTGAGAAGCTCTGTCTCTGGTTGTTCTAAAGTTAACTCTATCCATATAAATTGTGGAGGAACATCATCAGTAAAAGTGAAGGGAATCACATATGATGAAGATGGACGTGATGGGACAGCATTGTTCGACAGAGGTCAAAATAGAAATTGGGCAGTTAGCACCACCGGTGACTACACGGATGTAGAAAAAGAGTATTCTACTTTCTCATTAAATGACACTTCTGCCCTCTCTTCCAATGATGCTTATAGCCAACTATACAAAGATGCACGTGTTTCTCCTATTTCTCTAACTTACTATGGATTTTGTCTTCATAATGGAAACTACAAAGTCAAGCTCCATTTTGCTGAGATTATGTTTACCAATGATCAAACCTATAAAAGTCTTGGAAGGCGTCTATTTCACATCTACATTCAGGGAATGTTAGTGGAGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGTGTTGGTAAGGCAATCATAAAAACTTACACAGCAACTGTCACTAATAATACCATTGAGATTCGATTTTATTGGGCTGGAAAAGGGACAACTACAATCCCACAGAAATCAGTGTACGGTCCTCTTATATCAGCCATATCTGTGGAGAATGAAAATGGAGGTAGCATATCAACAAGGGCTGTGATTGGAATTGTTGCTGCAGTGGTCATTATCATCATCATCTTAGTACTTAGTGTGCTTTGGTGGAAGGGCTACCTAGGAAACAGAAACTCTCCTTCAAGAGAGCTTATGAGTTTAGATATACAAACAAGTTTATTTTCCTTAAGACAAATCAAAGCAGCAACAAATAATTTTGATATCACCAATAAAATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAAAGTTACCTAATGGTACAATAATTGCAGTGAAACAACTTTCTTCAAAATCAAAGCAAGGAAATCGTGAATTCTTAAATGAAATAGGCGTAATTTCTACTTTACAACATCCATGTCTTGTTAAACTCTACGGATGCTGTGTTGAAGGAGATCAATTATTATTGGTATACGAATACATGGAAAACAATAGTCTTGCTCGTGCATTATTTGGTCCAAAGGAACACCAAATACAATTGAATTGGCCAACAAGACAGAACATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTRCATGAAGAATCGAGATTGAAGATAGTTCATAGAGATATTAAAGCCACAAATGTCTTGCTTGATAYAGATCTTAATCCAAAGATATCGGATTTTGGTTTGGCCAAACTTGATGAAGAAGACAATACCCACATTAGTACCCGAATAGCAGGAACATATGGATATATGGCTCCCGAATATGCAATGCATGGTTATCTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCTTTGGAAATCATTACTGGGAAGACTAATACAACTATGAGGCAAAAAGAAGATGTAATTTATCTGCTTGATCTGGCACGTTTATTGAAAGAGAAAGGCAATCTGATGGAATTAGTTGATAGAAGATTGGGCTCAAACTTTGATGAAAAAGAAGCCATGGTAATGATTAAGGTGGCTTTATTATGCACTAATGTGTCTCCAGCACATAGACCAAACATGTCTTCAGTGGTAAGCATGTTAGAAGGTAAAATTATAGTTCAGGAACCAACTTTTGATGAGCAAAGTGAGGCGTTGGATGAGAAGAAATTGGAGGCAATGAGATTGTATTGTTTTGAAGACCAAAGTATCTCAATGGAGGATCCATGGACTACTGCATCTACTTCTACAAAAGATTTGTATCCATTACATTTGGACTCTTCTTACTTAGAAAAGAGAAATCATTAG 3015 0.3745 MNMISPFSLFFLLLVAAFCFSSQAFGATQLPENEVEALQSIAKTLGIKNWNPSADECNKLVGQNNWTSCSEFKDDEYQNVVICNNCSSDAVCHVTNLCMKRQNLSGTLPPELVRLPYLQEIDLTFNYLNGTIPSEWGSMNLLNISLGGNRLTGPIPKEITNISTLQSFVVESNQMYGDLPLELGNLTQIQRLLLSSNNFTGELPATLAKLTNLQDIRLGDNQFSGKIPDFIESWTNLTTLNIIGSGLSGPIPSGISKLRNLTDLRISDLNGSEISSFPELNTRSMKYLILRSCNIHGILEDYLSTMTISQILDLSFNKLTGPIPSSYQELTKVNYIFLTGNLLNGSVPSWTSDATSLDLSYNNFNQDYQQQCQSGNVNLFAATSPTINNSGIVSCLRSSVSGCSKVNSIHINCGGTSSVKVKGITYDEDGRDGTALFDRGQNRNWAVSTTGDYTDVEKEYSTFSLNDTSALSSNDAYSQLYKDARVSPISLTYYGFCLHNGNYKVKLHFAEIMFTNDQTYKSLGRRLFHIYIQGMLVEKDFNIAKEAGGVGKAIIKTYTATVTNNTIEIRFYWAGKGTTTIPQKSVYGPLISAISVENENGGSISTRAVIGIVAAVVIIIIILVLSVLWWKGYLGNRNSPSRELMSLDIQTSLFSLRQIKAATNNFDITNKIGEGGFGPVYKGKLPNGTIIAVKQLSSKSKQGNREFLNEIGVISTLQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPKEHQIQLNWPTRQNICIGIARGLAYLHEESRLKIVHRDIKATNVLLDXDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIITGKTNTTMRQKEDVIYLLDLARLLKEKGNLMELVDRRLGSNFDEKEAMVMIKVALLCTNVSPAHRPNMSSVVSMLEGKIIVQEPTFDEQSEALDEKKLEAMRLYCFEDQSISMEDPWTTASTSTKDLYPLHLDSSYLEKRNH* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2297 1004 Gene3D Transferase(Phosphotransferase) domain 1 742 960 - -
Amo07g2297 1004 Pfam Protein kinase domain 668 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2297 1004 Gene3D - 406 600 - -
Amo07g2297 1004 ProSiteProfiles Protein kinase domain profile. 666 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2297 1004 SUPERFAMILY Protein kinase-like (PK-like) 639 938 IPR011009 -
Amo07g2297 1004 Gene3D Ribonuclease Inhibitor 75 402 IPR032675 -
Amo07g2297 1004 SUPERFAMILY L domain-like 86 348 - -
Amo07g2297 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 82 957 - -
Amo07g2297 1004 Pfam Malectin domain 408 594 IPR021720 -
Amo07g2297 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Amo07g2297 1004 SMART serkin_6 666 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2297 1004 CDD STKc_IRAK 672 939 - -
Amo07g2297 1004 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 82 957 - -
Amo07g2297 1004 Gene3D Phosphorylase Kinase; domain 1 634 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2297 Amo-Chr7 68925599 68938539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2297 27 963 Receptor kinase-like Gene Family AT1G53420 54.979 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2297 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2297 - - gmx:732563 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1804 18 39446229 39455235 Amo07g2297 07 68925599 68938539 hybridization