Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2295 CAAACTCTGCAAAGCATAGCAAAGACACTTGGGATCAAGAATTGGAATCCTAGCGTTGATGAATGCAATAAGCGGCAGGGAAGAAACAATTGGAGTTCATGTTGGGAATTTAAAGATGATGAATATCAGAATGTTGTCATCTGCAATTGCTCCATTGACACTGTTTGTCATGTCACTAACTTAGGCTTAGCATACCTCCATGAAGAATCAAGATTGAAGATAGTTCATAGAGACATTAAAGCCACAAATGTCTTGCTTGATAGAGATCTTAATCCGAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAGGACAATACCCACATTAGCACCCGAATAGCAGGAACATATGGATATATGGCTCCAGAATATACAATTTTTGGAATTGTTGCTTTGGAAATCATTACGAGAAAGACTAATACTATTCTGCGGCAGAAAGAAGAAGTAATTTATTTGCTTGATCTGGCACGTTTGTTGAAAGAGAAAGGCAATCTAATGGAGCTAGTTGATAGAAGATTGGGCTCAAATTTTGATAAAGAGGAAGCCATGATAATGATTAAGGTGGCTCTATTATGCATTAATGTGTTTGCAACACTTAGACCAAACATGTCTTCAGTAGTAAGTATGTTAGAAGGCAAAATTATAGTTCAAGAACCAGTTTTTGATAAGCCAAGTGAGGCATTGGATGAAAAGAAATTGGAGGCAATGAGATTGTATTGTTTTGAAGATCAAATGGAAGCTCTGAACGACATAGCTAAGACGCTTGGAAAGGAGAATTTGTTTTCTGAAGAAAAAGATGTATGCAGTAGTAGTGAAGAAGAACAAAGTGGGAGCTCGTGCATGATGTTGAAGGGTAATCAAACTACTGTTGTCATCTGCAACTGCTCCTATGCCGATTCCACTCTCTGCCATGTCACTAGCTTATGTGTGAAACGACAAAGTCTCCCAGGTCAACTCCCACCAGAACTTGTGAGGTTGCCTTACCTTCAACAAATATCCTTAGGGGGAAATCGAATAACGGGTTCAATTCCAAAAGAGATAGCAAACATTTCCACACTCCAAGTTTTTGTTGTTGAGTTCAATCAAATGTCTGGAGAGCTTCCTCTTGAGCTTGGGAATCTCTCACAACTTCAAAGACTGCAAATTAACTCAAACAATTTTACCGGAGAGCTTCCTGCAACACTTGCCAAGCTCACATCATTGCAGATTGTAGTAATTCAAGGGAGTGGGCTTAGTGGGCCAATTCCTTCCGGGATTTCAGTTTTGGAACACTTAAACGACTTGAGAATAAGTGATCTGAATGGAGATGAAAACTCATCTTTTCCTCAACTTAAAAATATGTCAATGAAAAATCTGATTTTGAGGAGTTGCAATATCAATGGAACACTACCTACATATCTTGGGAACATGACAAGTTTACAAACCTTAGACCTCAGCTTCAACAAATTAACTGGACCAATTCCATCTCAATATAAGAACCTTATCACCCGATTAGTGGCATACATGTATTTAACTGGAAACTTCCTCACGGGAGATGTAAGTGAGGCATGGATAGATAAAGCTAATAGGAAGCACTACTTAGACCTTTCGTACAATAACTTCAGCATTAGTGGGAGCCAAGATAATCAAGGATGTCAAGATGAAAATACGAACTTATTTGCCAGCTCTTTGACACGAAATGACACCGGAAAGGTTTCATGTTTGGAAAGCAGTGTGTGTTCTAAAACCTCATACTCTTTTCGTATAAATTGTGGTGGAGAAAAGGTAACAATAAATGGAAAGACATATGATGATGACACAGATGAAGGAGGAGCAGCAAAGTTCTATGACAATGAAAATACATATTGGGCATTCAGTAGTACCGGTAACTACTTAGAAAGTAAAACTCCAAACTATATTCCATCTATTGATTCTAGTATGCTCTCTTTAAACAATAACAATGATGCTGAGCTCTACACCAATGCACGTGCATCTCCTGTTTCTTTGACTTACTATGGATTTTGCCTTGGAAATGGAAACTATATTGTGGATCTGCATTTTGCTGAGATTGTGTTTACTCATGATCAAACATATAAGAGCCTTGGAAGACGTATATTTGACATCTACATTCAGGGAAACCTAGTGCGAAAGGACTTCAACATTGCAGAGGAAGCAGGAGGCATAGGTAAAAATGTTATAAAATCGTTCAATGCAAGTGTGATTAATGGTACCTTAGAGATTCGTCTTTACTGGGCTGGCAAAGGAACAACTGCTATCCCACAAAAATCAATTTATGGTCCTCTTATATCAGCCATATCTGTCTATCGTGATCATAGAAGTGGAATATCAACAGCTGCTGTGGTTGGAATTGTTGTTGCCGTGGCAATTATTATCATCTTGTTGATATTTGGCATGCTTTGGTGGAAAGGCTGTTTGGGAAAGAGAAATTCAAAAGAACTAAACGGTATAAAGTTGGAAACTGGTATGTTTTCTATACGACAAATCAAAATGGCAACAAATAACTTTGATATCATCAACAAGATTGGAGAAGGAGGATTTGGTCCCGTGTATAAGGTATTTTATCATATATAG 2574 0.38 QTLQSIAKTLGIKNWNPSVDECNKRQGRNNWSSCWEFKDDEYQNVVICNCSIDTVCHVTNLGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYTIFGIVALEIITRKTNTILRQKEEVIYLLDLARLLKEKGNLMELVDRRLGSNFDKEEAMIMIKVALLCINVFATLRPNMSSVVSMLEGKIIVQEPVFDKPSEALDEKKLEAMRLYCFEDQMEALNDIAKTLGKENLFSEEKDVCSSSEEEQSGSSCMMLKGNQTTVVICNCSYADSTLCHVTSLCVKRQSLPGQLPPELVRLPYLQQISLGGNRITGSIPKEIANISTLQVFVVEFNQMSGELPLELGNLSQLQRLQINSNNFTGELPATLAKLTSLQIVVIQGSGLSGPIPSGISVLEHLNDLRISDLNGDENSSFPQLKNMSMKNLILRSCNINGTLPTYLGNMTSLQTLDLSFNKLTGPIPSQYKNLITRLVAYMYLTGNFLTGDVSEAWIDKANRKHYLDLSYNNFSISGSQDNQGCQDENTNLFASSLTRNDTGKVSCLESSVCSKTSYSFRINCGGEKVTINGKTYDDDTDEGGAAKFYDNENTYWAFSSTGNYLESKTPNYIPSIDSSMLSLNNNNDAELYTNARASPVSLTYYGFCLGNGNYIVDLHFAEIVFTHDQTYKSLGRRIFDIYIQGNLVRKDFNIAEEAGGIGKNVIKSFNASVINGTLEIRLYWAGKGTTAIPQKSIYGPLISAISVYRDHRSGISTAAVVGIVVAVAIIIILLIFGMLWWKGCLGKRNSKELNGIKLETGMFSIRQIKMATNNFDIINKIGEGGFGPVYKVFYHI* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2295 857 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 461 536 - -
Amo07g2295 857 SUPERFAMILY Protein kinase-like (PK-like) 61 220 IPR011009 -
Amo07g2295 857 Gene3D Phosphorylase Kinase; domain 1 803 856 - -
Amo07g2295 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Amo07g2295 857 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 461 536 - -
Amo07g2295 857 Gene3D Ribonuclease Inhibitor 426 561 IPR032675 -
Amo07g2295 857 Gene3D - 576 773 - -
Amo07g2295 857 Gene3D Transferase(Phosphotransferase) domain 1 52 220 - -
Amo07g2295 857 Pfam Malectin domain 580 766 IPR021720 -
Amo07g2295 857 SMART serkin_6 4 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2295 857 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 561 852 - -
Amo07g2295 857 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 61 257 - -
Amo07g2295 857 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 299 460 - -
Amo07g2295 857 Gene3D Ribonuclease Inhibitor 246 425 IPR032675 -
Amo07g2295 857 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 561 852 - -
Amo07g2295 857 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 61 257 - -
Amo07g2295 857 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 299 460 - -
Amo07g2295 857 SUPERFAMILY L domain-like 283 537 - -
Amo07g2295 857 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2295 857 SUPERFAMILY Protein kinase-like (PK-like) 820 855 IPR011009 -
Amo07g2295 857 Pfam Leucine Rich repeat 471 486 IPR001611 GO:0005515
Amo07g2295 857 Pfam Protein kinase domain 44 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2295 Amo-Chr7 68838107 68866895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2295 311 852 Receptor kinase-like Gene Family AT1G53420 46.812 5.06e-156 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2295 Malectin 2.3e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2295 - - ahf:112703562 936.021