Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2290 ATGAAGATGATGATCACTACTTCCTCTAAACTTTTCTTCTTTTCATCATTCCTTGCACTTTGCTTCATGCTATGTCCTACAGAAGCTGCTTCTCGGCTGCCAGACACAGAAGTGGAAGCTCTGAAGCAAATAACAAAAACGCTCGGTTGGGACTTGAAGAACATAGATCCATGCAGTAAGGGGGGGATTATTTCAAACCCAGTTCGCTCAACATCAGAAATAATTAATGTTTCATGTGATTGCTCCATTGCTCATGACAACTTCTGCCATATCATTGCCATTGCACAAAATCTTCAAGGAAAACTTCCTCCAGAACTTGTCAAGCTGCCATACCTTCAAGAGATTAATCTTACCCGCAATTACCTTAGCGGTACGATTCCTAGAGAATGGGGTACGATGAACCTTACCAAAATTGCACTTGTTGCAAACGGACTGAGTGGTGAAATCCCTAAGGAGCTAGCAAACATCACCACTCTCAAAACTTTGTCCTTAGAGTTCAATAATTTCTATGGAAATCTTTCAGTTCTTGGGTCTCTTCCACACCTTGAAATACTGCATCTTACCTCTAATAATTTCACTGGAGAACTGCCTGAAACATTTTCAAATCTAATCACATTAAAGGAACTCCGTCTTGGTGATAATCAATTCTCAGGAAAAATACCTAATTTCATACAAAAATGGACAGGACTTGAAAATCTAGTAATACAGGGGAGTGGTTTTACTGGGCCAATTCCATCTGAAATTTCATATTTACTTAATTTAGAAGACTTGAGGATTAGTGACCTGAATGGACCTCAGTCTAAATTCCCACCTCTCGATAATATGACAAACTTGGGAGTATTGATATTAAGGAGTTGCAACATTAATGACACAATCCCTAATTATCTTGGAAATTTTAAAAATTTGAAAACATTAGACCTCAGCTATAACAAATTAGGAGGAGAAATTCCAGAGTCTCTTACATCGCTATCAAGTATAAAGTACATATATTTAACTGGAAACATTCTCAGTGGACAAGTGCCCGCCGATTGGACTGCACCCATAGATCTTTCATATAACAACTTCACCAACTCCCCACAAACAGTGACATGTCAAACGTCAAACATGAACTTGTTTGCGAGTTTTGCAAAAGGCAACAACACAGGACCTCTTTCTTGTGGGCAAAGCAAAGAAAAATGCCCAAAATACTATTATTCCTTCCATATAAATTGTGGTGGAGATAGTAATGTACAGAAAGGAAGGATAATATATGAGAGTGATTCATATAAGGGAGTGCCATTTAAGAAAAGTAGAGCTGAATCATCAAATTGGGCAATTAGTACAACTGGTGTTGATTTCATGGATAATGTTCATCAGTACGACCTTATCCAAGAAAATGAAACCAAACTTGACATAGTTGATGATGCTGATCTTTATACAAAGGCACGTGGTTCTCCCATTTCTTTGACTTACTATGGCTTTTGCCTGGCAAATGGAAACTACACCGTCAATCTCCACTTTGCAGAGATCGTTTTTATCAATGGCACCACATATAAGAGCCTAGGAAGGCGTATATTTGATGTATACATTCAGGGAGAGCGTGTTCTAAAGGATTTCAATATTGCAAAAGAAGCAAAAGGAATCGGAAAGGCAAATATTCAAAATTTGAGTGCTTACGTGAGCAACAATGAGTTAGAGATCCGGTTATATTGGGCAGGGAAAGGTACTACTGGTGTTCCATATAGATCACAATATGGCCCTCTTATATCAGCAATTTCTGTCACTTCTGACTCATTACCTAAGCACAATCACATATCTACAAGGCTAATGGCTGGAATTGTTGCTCCAACAGTCATAGTTATCATCCTAATTATTTGTCTACTTTGGTGGAAAGGTTGTCTAAGAAAGAAAACATCATTAGAAAAAGAGCTAAGAAATTTAGATCTACAAACTGGTCTATTTTCCTTGCATCAAATTAAGGCAGCAACAAACAACTTTAATATCTCCAATAAAATTGGTGAAGGAGGCTTTGGCCCTGTTTATAAGGGTATTTTACCAAATGGCACTATAATAGCAGTCAAACAACTTTCATCTAAATCAAAGCAAGGAAACCGTGAGTTCATCAATGAGATAGCAATGATCTCAGCATTACAACACCCTTGTCTTGTTAAACTTTATGGATGCTGTGTTGAGGGAGATCAATTATTGTTGATATATGAATATATGGAAAACAATAGCCTTGCATATGCATTATTCGGGAACAAAGAGAATCAATTAAAATTGAATTGGCCAACGAGACAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTTTCTCCATGAGGAATCAAGATTGAAAATTGTTCATAGGGATATTAAGGCAACTAATGTGTTGCTCGACAAAAATTTAAATCCAAAAATTTCTGATTTTGGTTTAGCCAAACTCCATGAAGAGGATGCTACTCACATTAGTACTCGAATAGCTGGGACATATGGATATATGGCACCTGAATATGCAATGAATGGTTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGTCCTGGAACTTGCACATTTGTTGAAAGAGAAAGGCATGCTCATGGAGCTAGTTGATCGAAGGTTAGGTTCAGATTTTAATGAAGAGGAAGTAATGGTGATGATCCAAGTAGCTCTGTTATGCACCAATGCAACTGCAAATCTTAGGCCTTCCATGTCTTCAGTTCTAAGCATGCTTGAAGGCAAAATCATTGTTCCAGAATTCGTTTCAGATCAAAGTGAATTAATGGATGAGATGAAGTTAGAGGCAATGCGACAATATTACTATCAAAAGGAAGAAAATAAAATAAATGAGGCCAACAATAATGTGTCACATAATGTTGTTGAAGAACAATGGATTGCTTCATCTTCGTCTGACCTCTATCCTATGCACATTGATTCTTCATCATATTATTGGGAGCAAAGAAACTAG 2961 0.3725 MKMMITTSSKLFFFSSFLALCFMLCPTEAASRLPDTEVEALKQITKTLGWDLKNIDPCSKGGIISNPVRSTSEIINVSCDCSIAHDNFCHIIAIAQNLQGKLPPELVKLPYLQEINLTRNYLSGTIPREWGTMNLTKIALVANGLSGEIPKELANITTLKTLSLEFNNFYGNLSVLGSLPHLEILHLTSNNFTGELPETFSNLITLKELRLGDNQFSGKIPNFIQKWTGLENLVIQGSGFTGPIPSEISYLLNLEDLRISDLNGPQSKFPPLDNMTNLGVLILRSCNINDTIPNYLGNFKNLKTLDLSYNKLGGEIPESLTSLSSIKYIYLTGNILSGQVPADWTAPIDLSYNNFTNSPQTVTCQTSNMNLFASFAKGNNTGPLSCGQSKEKCPKYYYSFHINCGGDSNVQKGRIIYESDSYKGVPFKKSRAESSNWAISTTGVDFMDNVHQYDLIQENETKLDIVDDADLYTKARGSPISLTYYGFCLANGNYTVNLHFAEIVFINGTTYKSLGRRIFDVYIQGERVLKDFNIAKEAKGIGKANIQNLSAYVSNNELEIRLYWAGKGTTGVPYRSQYGPLISAISVTSDSLPKHNHISTRLMAGIVAPTVIVIILIICLLWWKGCLRKKTSLEKELRNLDLQTGLFSLHQIKAATNNFNISNKIGEGGFGPVYKGILPNGTIIAVKQLSSKSKQGNREFINEIAMISALQHPCLVKLYGCCVEGDQLLLIYEYMENNSLAYALFGNKENQLKLNWPTRQKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLHEEDATHISTRIAGTYGYMAPEYAMNGYLTDKADVYSFGIVVLELAHLLKEKGMLMELVDRRLGSDFNEEEVMVMIQVALLCTNATANLRPSMSSVLSMLEGKIIVPEFVSDQSELMDEMKLEAMRQYYYQKEENKINEANNNVSHNVVEEQWIASSSSDLYPMHIDSSSYYWEQRN* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2290 986 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 861 956 - -
Amo07g2290 986 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 81 289 - -
Amo07g2290 986 Gene3D Ribonuclease Inhibitor 174 266 IPR032675 -
Amo07g2290 986 Gene3D Ribonuclease Inhibitor 267 393 IPR032675 -
Amo07g2290 986 SUPERFAMILY RNI-like 97 357 - -
Amo07g2290 986 Pfam Leucine Rich repeat 179 195 IPR001611 GO:0005515
Amo07g2290 986 Gene3D Ribonuclease Inhibitor 36 173 IPR032675 -
Amo07g2290 986 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 385 854 - -
Amo07g2290 986 SUPERFAMILY Protein kinase-like (PK-like) 645 924 IPR011009 -
Amo07g2290 986 Gene3D - 397 592 - -
Amo07g2290 986 Gene3D Transferase(Phosphotransferase) domain 1 735 921 - -
Amo07g2290 986 Pfam Leucine rich repeat 277 334 IPR001611 GO:0005515
Amo07g2290 986 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 290 346 - -
Amo07g2290 986 CDD STKc_IRAK 665 911 - -
Amo07g2290 986 Gene3D Phosphorylase Kinase; domain 1 624 734 - -
Amo07g2290 986 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 385 854 - -
Amo07g2290 986 Pfam Protein tyrosine and serine/threonine kinase 660 908 IPR001245 GO:0004672|GO:0006468
Amo07g2290 986 ProSiteProfiles Leucine-rich repeat profile. 301 323 IPR001611 GO:0005515
Amo07g2290 986 SMART serkin_6 659 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2290 986 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 290 346 - -
Amo07g2290 986 Pfam Malectin domain 399 585 IPR021720 -
Amo07g2290 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Amo07g2290 986 ProSiteProfiles Protein kinase domain profile. 659 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2290 986 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 861 956 - -
Amo07g2290 986 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 81 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2290 Amo-Chr7 68743071 68759121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2290 29 938 Receptor kinase-like Gene Family AT1G53420 53.481 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2290 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2290 - - gmx:100785451 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1842 18 41463377 41474184 Amo07g2290 07 68743071 68759121 hybridization