Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2275 ATGCTGGTTTATGAGTTTGTTCCAAATGGAACCTTGAAGGATACTATCACAGTAGCCCTTGGAGCTGCAAGGGGTTTGGCTTATCTTCATGAACACACTGATCCTCCAATCATACACAGGGACATCAAATCAAAGAACATTTTGCTGGATGAGAAGCTTGATGCAAAAGTTGCTGATTTTGGCCTATCCAAACCAATATTAGATTATGGCAAAGATCATGCCACCACTCAAGTTAAAGGAACAATGGGATACTTGGATCCGGAATACTACATAAGTCAGCAGGTGACTGAGAAGAGTGATCTGATAACTGGAAGAAAGCCGATTGAACGAGGGAAATACATTGTGAAAGTGGTCAGGAATTCAATTGACAAGACTAAGGACATGTATGGCCTGCATGAACTCATCGACCGAGCCATCTCTGATGGCTCGGACCTGAATGTTTTCGACAAGTTTGTTGATCTTGCAATGATGTGTCTTGAAGAATCAGGAGCTGACAGGCCTCCAATGAGTGATGTAGTGAAAGAGATTGAAATCATATTGCACTCAATTGGGTTGGACCCTGCTGCTGATCAATCTGAACCATCAACTTCTTCAATTCCCATCAACCTTACAGCAGTGAATCCTTGTATTCAAGCTCCGAATATATACAAAAAAACCATGAGCATGAGCCTAGATAAGTCTTCTAAGATCCAAGGTAAGAGAAAAATAGAACAACTTTTGGATAATGAGTTTGTAAATGTTAGCTGA 747 0.4083 MLVYEFVPNGTLKDTITVALGAARGLAYLHEHTDPPIIHRDIKSKNILLDEKLDAKVADFGLSKPILDYGKDHATTQVKGTMGYLDPEYYISQQVTEKSDLITGRKPIERGKYIVKVVRNSIDKTKDMYGLHELIDRAISDGSDLNVFDKFVDLAMMCLEESGADRPPMSDVVKEIEIILHSIGLDPAADQSEPSTSSIPINLTAVNPCIQAPNIYKKTMSMSLDKSSKIQGKRKIEQLLDNEFVNVS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2275 248 SUPERFAMILY Protein kinase-like (PK-like) 1 203 IPR011009 -
Amo07g2275 248 Pfam Protein kinase domain 16 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2275 248 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2275 248 Gene3D Transferase(Phosphotransferase) domain 1 7 192 - -
Amo07g2275 248 PANTHER KINASE PBS1, PUTATIVE-RELATED 1 195 - -
Amo07g2275 248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Amo07g2275 248 PANTHER OS01G0253100 PROTEIN 1 195 IPR045271 GO:0004714|GO:0006468
Amo07g2275 248 SMART serkin_6 2 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2275 Amo-Chr7 68455570 68456590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2275 1 195 Receptor kinase-like Gene Family AT5G49760 54.091 1.08e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Amo07g2275 Pkinase 9.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2275 - - aip:107638778 362.073