Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2272 ATGAAACTCGAGATAGGGAACACACTTGGGAAGAAAGATTGGGACTTCAGCGTAGATCCATGTAGTGGAGAACGAAACTGGTCTTCCCCTGCTTCCAAATCTTACTCGACACTAAATGCTGTCACTTGTGATTGTTCTTTCTCTAATAACAATCTCTGCCATGTTGTTGGCATAGTTCTAAAAAAACAAAATCTAACTGGCACTCTTCCTCCGGAGTTTGCAAAGTTGCCTTACCTGCAAGAAATTGATCTCACTCGCAACTATCTTAACGGCACAATCCCAAAGCAATGGAGTTCCTTGAATGTTGTTAACATTTCCCTTTTTGGAAATCGAATAACAGGCTCAATTCCAAAGGAGCTGGGAAACATAACTACCCTGAAAAGTTTGTCCTTGGAGTTCAATCAACTCTCTGGAGAGCTTCCTCCTGAGCTTGGGAATCTTTTGCAGCTTGAAAGATTGCATGTTAGCTCCAACTCTTTTACTGGGAATTTACCCACTACACTTGCGAGGCTCAGTAAATTGAATTACGTTCGACTCAGTGATAATCAATTTTCTGGAGCAATACCCAATTTTATTCAGAGCTGGACAAGTCTTCAGAGGCTGTGTGAATCTTTGATTTCTCCTGTGAAATTTGAGCCTTACGTTGTTACTTTTTTTTCTAATTACACATTATCAATTGGTTTACCAAAGGAATGTGGTATGAGTGGACCAATTCCTTCTGGAATTTCATTTCTGAAAAACCTTACTGACTTGAGAATCAGCGACTTGAAAGGACCAGATTCTTATTTTCCACCACTCCGTAACTTGACAAATTTGGAAACACTAGTACTGAGAAGTTGCAATCTTATAGGATCGATTCCTGAATATCTTGGAAATGTAACTAATTTAAACTCGTTAGACCTCAGTTTTAACAAATTAAGTGGAAGTATCCCAAACTCCCTCCGTGTCCCAGAGAACATGAATATACTGTACTTAACTGGAAACTTTTTCACTGGACCACTGCCAATTGGATTGCTAACCCAGACTACACGTGAGCAATTCTGCATTACTTTTATGATTTCTTGCATTAAATTAAATGTTTCGCTTAGTACATTATTCTTAGGATTCTTCTGTGCTACCAAGGATCTTTCGTATAACAACTTCAGCATCGAAAAGCCAGAGCAGTTGACATGTCAACAAGGAACTGTGGGAACTTATCCATGTCTGGGGATCACCAGCTGTCCTAAACCTTCATACTCTCTCCATATAAATTGTGGTGGGAAGATCATAACTTATAATGGAAACATTACATATGATGAAGATTCACAAGAAGCTGGACCAGCAAAATCTCTTCGTAGTGGATCAAACTGGGCAGTTAGCAACACCGGTCACTTCTTTGATAGTGGTATTTCAGACTATTATACATGGTCTAACATGTCTAAGCTTGCTATGAACAATGCCGAACTGTACATGGATGCACGTGTTTCGGCGCTTTCTCTTACATATTATGGGTATTGCATGGGAAATGGAAGCTACACTGTAAATCTCCATTTTGCAGAGATAATGTTTACTGATGATCAAACATATAGTAGCCTTGGAAGGCGTGTATTTGACATATATATTCAGAGGAAGTTGTTGCTAAAGGATTTCGATATTGCAAAAGAAGCAGGAGGAGTCAGGAAGCCCATCATAAAAAATTTTACAGCTATTGTGACCAGTGGTACCTTGGAGATCCGCTTACAATGGGCCGGGAAAGGGACAACTGCCATTCCATTTGGATCAGTATATGACTTTACACCCCCACTGGAAGAAGAAAGTAACAAAAAAGGAAGTGGCATAGCTGTGGGGGCTATCATTGGAATTGTATTGGCTGGAGCACTTGTTATTGTCATGGCATTTGGTATAGCTTGGTGGAGAGGATGTTTACGACAAAAAGGTTCATTATATAGAGACCTACAGGGTTTGGATCTAAAAACTGGCATATTTACCTTAAGGCAAATCAAAGCAGCAACAAACAACTTTAGTGTTGCCTGCAAGATTGGAGAAGGAGGGTTCGGTCCAGTATATAAGGGTATTCTTCCAGATGGCACAGCAATAGCAGTTAAACAGCTTTCTTCTAGATCGAAGCAGGGGAATCGTGAGTTCACAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAAATGTTGTTGATATATGAATATATGGAAAACAACAGCCTTGCCAGTGCTCTGTGGGGCAAAGAGAAAACTCAATTGAAATTGGACTGGTCAACAAGGCGCAAGATTTGTATAGGCGTTGCTAAAGGCTTGGCTTACCTCCATGGAGAGTCAAGATTAAAAATAGTTCATAGGGACATCAAGGCTACTAATGTGTTGCTGGATAAAGATCTAAACCCAAAAATATCGGATTTCGGTTTGGCCAAGCTTGATGAAGAGGGTCAAACACACATAAGCACTAAAGTGGCTGGCACTTATGGATATATGGCACCCGAATATGCAATGCGTGGTTATTTGACGGACAAAGCAGATGTGTATAGTTTCGGAATTGTTGCCTTGGAAATAGTTAGCGGCAAAAGCAACAACATGGGCTGGCAAAAGGAAGAATGCTTCTCTCTTTTTGACTGGGCTCTTCTCTTGAAAGAGAAAGGTGATCTAATGGACCTAGTTGATGAGAAGTTGGGTTCACACTACAAAAAAGATGAAGCAATGCTCATCATCAACGTGGCTCTTCTCTGCACAAATACCTCTCCATTGAACCGACCAACCATGTCGTCAGTGGTAAGCATGCTCGAAGGCAAAACCGCTGTACAAGAAGTGGTGCCGGACACGACGCAGGTATTTGGCGAGAAAAAGTTAGAGATGATCCGAGAGTATTACCAACAGAAGGGGAAAGATAAGATTCCAGACACTGAAGAAGTGAGCACATCAACTAATGAAACTGCTGCATTTGTGGCTAATTCAAAAGACAATTCAATCAACATGGATTCTTCTTATTGGGAAAGAAGTGGTAGATGA 3039 0.407 MKLEIGNTLGKKDWDFSVDPCSGERNWSSPASKSYSTLNAVTCDCSFSNNNLCHVVGIVLKKQNLTGTLPPEFAKLPYLQEIDLTRNYLNGTIPKQWSSLNVVNISLFGNRITGSIPKELGNITTLKSLSLEFNQLSGELPPELGNLLQLERLHVSSNSFTGNLPTTLARLSKLNYVRLSDNQFSGAIPNFIQSWTSLQRLCESLISPVKFEPYVVTFFSNYTLSIGLPKECGMSGPIPSGISFLKNLTDLRISDLKGPDSYFPPLRNLTNLETLVLRSCNLIGSIPEYLGNVTNLNSLDLSFNKLSGSIPNSLRVPENMNILYLTGNFFTGPLPIGLLTQTTREQFCITFMISCIKLNVSLSTLFLGFFCATKDLSYNNFSIEKPEQLTCQQGTVGTYPCLGITSCPKPSYSLHINCGGKIITYNGNITYDEDSQEAGPAKSLRSGSNWAVSNTGHFFDSGISDYYTWSNMSKLAMNNAELYMDARVSALSLTYYGYCMGNGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQRKLLLKDFDIAKEAGGVRKPIIKNFTAIVTSGTLEIRLQWAGKGTTAIPFGSVYDFTPPLEEESNKKGSGIAVGAIIGIVLAGALVIVMAFGIAWWRGCLRQKGSLYRDLQGLDLKTGIFTLRQIKAATNNFSVACKIGEGGFGPVYKGILPDGTAIAVKQLSSRSKQGNREFTNEIGMISALQHPCLVKLYGCCMEGDQMLLIYEYMENNSLASALWGKEKTQLKLDWSTRRKICIGVAKGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGQTHISTKVAGTYGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNNMGWQKEECFSLFDWALLLKEKGDLMDLVDEKLGSHYKKDEAMLIINVALLCTNTSPLNRPTMSSVVSMLEGKTAVQEVVPDTTQVFGEKKLEMIREYYQQKGKDKIPDTEEVSTSTNETAAFVANSKDNSINMDSSYWERSGR* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2272 1012 ProSiteProfiles Protein kinase domain profile. 667 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2272 1012 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 232 282 - -
Amo07g2272 1012 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 46 202 - -
Amo07g2272 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Amo07g2272 1012 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 393 981 - -
Amo07g2272 1012 Gene3D Ribonuclease Inhibitor 225 396 IPR032675 -
Amo07g2272 1012 SUPERFAMILY L domain-like 37 351 - -
Amo07g2272 1012 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 348 - -
Amo07g2272 1012 Gene3D Transferase(Phosphotransferase) domain 1 743 953 - -
Amo07g2272 1012 SMART serkin_6 667 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2272 1012 SUPERFAMILY Protein kinase-like (PK-like) 653 939 IPR011009 -
Amo07g2272 1012 Gene3D Ribonuclease Inhibitor 101 224 IPR032675 -
Amo07g2272 1012 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 282 348 - -
Amo07g2272 1012 ProSiteProfiles Leucine-rich repeat profile. 295 317 IPR001611 GO:0005515
Amo07g2272 1012 CDD STKc_IRAK 673 940 - -
Amo07g2272 1012 Pfam Protein tyrosine and serine/threonine kinase 670 938 IPR001245 GO:0004672|GO:0006468
Amo07g2272 1012 Pfam Malectin domain 413 590 IPR021720 -
Amo07g2272 1012 Gene3D Phosphorylase Kinase; domain 1 636 742 - -
Amo07g2272 1012 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 393 981 - -
Amo07g2272 1012 Gene3D - 410 586 - -
Amo07g2272 1012 Gene3D Ribonuclease Inhibitor 12 100 IPR032675 -
Amo07g2272 1012 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 232 282 - -
Amo07g2272 1012 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2272 Amo-Chr7 68431468 68441267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2272 8 990 Receptor kinase-like Gene Family AT1G53420 50.604 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2272 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2272 - - gmx:100786496 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1876 18 42254476 42265747 Amo07g2272 07 68431468 68441267 hybridization