Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2234 ATGGTTGGATTCCAGAGTAGTGAACACATGCCTGGGAGCAAGTGTAACGGTAATTCTAATAATTTTCCAGGTCGAGTTGAACGACTCGTCAGAGGAAGAGAGCTAAGAAAAAATAATATTTATAATGCTAATGGCGTTGCTGAATATTTTGAGCGTGACCTGCGCTTGGGAGAAGAAAATAATTACTGTGTTGAACGTTCCCTAGAAGGGGTAGCAGCATCAAAGTCTCTTTGTGAAAGGGATGATGGGAAACCTTTCAGGCAACGGCTTTTGGTTGTTGCCAACAGGCTGCCAGTCTCAGCTGTTAGGAGAGGTGAGGATTCATGGTCTTTGGAGATAAGTGCCGGTGGCCTTGTTAGCGCTCTCTTAGGTGTGAAGGAATTTGAGGCAAGGTGGATAGGTTGGGCTGGAGTCAACGTGCCTGATGAGATTGGACAGAAGGCACTTACTAAAGCCTTGGCTGAAAAAAGATGTATCCCAGTGTTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTATTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCCACCACGCGTAGTTTCCAGTCTCAGTTTACAGCATATCAGAAAGCAAATCAAATGTTTGCTGATGTTGTTAATGAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTTATGTTTCTTCCACAATGCTTAAAGAAATATAATAGCAACATGAAAGTTGGCTGGTTTCTACACACCCCGTTTCCATCTTCTGAAATTCACAGGACTCTGCCATCTCGATCGGAGCTCTTGCATGCAGTTCTTGCAGCTGACCTAGTTGGCTTTCACACCTATGATTATGCACGGCATTTCGTTAGTGCATGTACACGCATCCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTCCCAATTGGTATAGACTCTCACCGATTTAAACGAGCACTTGAACTTCCTGAAGTCCAGAAGCACATCAAAGACTTAGAAGAAAGATTTAAACACAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATCAAAGGAATCCCTCAAAAAATTCTGGCATTTGAAAAATTTTTAGAAGAGAATCCTGACTGGCGTGAAAAAGTTGTTCTGCTTCAAATTGCTGTCCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGAAGATTCGGATCATTGACTGCTGTTCCTATACATCACCTGGATCGATCTCTTGACTTCTATGCATTATGTGCTTTGTATGCTGTTACAGATGTTGCACTTGTCACATCATTGAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTCGCTTGCCAAGCTAAAAAAAAAGGAGTTCTCATTCTTAGCGAATTTGCTGGTGCTGCGCAGTCTCTTGGTGCTGGGGCAATTCTGGTCAACCCCTGGAACATCACAGAAGTTGCCGCTGCAATTGACAAGGCTTTAAATATGGAACCAGTGGAAAGACAGAACAGACACAAACATAACTTTGAGCATGTAACACAGCACACTGCTCAGGAATGGGCAGAAACTTTTGTCAGTGAATTGAATGATACTGTTGTTGAGGCACAGCTAAGGACAAAACAAGCTCCACCCCGACTCCCAACCAAGACTGCAATCGAACGTTATCTGCAGTCAAGTAACCGATTGCTCATTTTGGGGTTTAATGGAACTTTAACTGAACCTGTTGAGAAAAGAGGTGACCAGTTTAAAGAAATGGAGCTCACTGTTCATCCAGAACTGAAACAACCCTTGAAAGAACTTTGCAGTGACCCAAAGACCACAATTGTTGTGCTAAGTGGAAGTGGTCGAGCAGTTCTAGATCAAAACTTCAAAGAGTATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTCTAAACCCTTCAAAGGGAGAATGGATGACAACAATGCCAGAACAGCTGAATATGGAATGGGTTGACAGTTTGAAGCATGTTTTTTTGTACTTCAGGGAGAGAACACCGCGGTCGTGTTTCGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAAACATGCAGATGTTGAGTTTGGAAGAGTTCAAGCAAGGGACATGCTGCAGCATCTTTGGACAGGCCCAATTTCTAATGCGTCAGTTGAAGTTGTTCAAGGTAGCAGATCTGTTGAGGTGCGAGCTGCTGGAGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGCAAATCCATGACAACACCGATTGATTATGTCCTCTGTATAGGACATTTTCTTGCAAAGCAGGATGAAGACATATATGCGTTTTTTGAGCCCGAGCTTCCTTCTTCCGGTGCGGCTCATTCACGAAGCAAGGTAACAGATGGAATCAAGTTTCCAGGTGAGAAGCCATCTTTGAAGATCCCTCCTAACAAAAATGGAACAAAGTCATCTCAAAATAAGGCACAACGGCCTGCTCCAAATTCTGAGAAGAAACCAACCAACCATGTCTGCCGTGCACCACGCCGGCCGGCTCCTGAAAAGATCTCTTGGAATGTGCTTGACCTAAAGAAGGAGAATTACTTCTCTTGCGCCGTTGGACGAACGCAAACGAATGCTCGGTATACACTTGGCTCTTCAGATGACGTTGTTGCATTTCTGAAGGAACTAGCTGGTGCTTCTTCAAACTCTCTATTTCAGAGTACCTGA 2784 0.4379 MVGFQSSEHMPGSKCNGNSNNFPGRVERLVRGRELRKNNIYNANGVAEYFERDLRLGEENNYCVERSLEGVAASKSLCERDDGKPFRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFTAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKKYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEYQGKLTRVAAFPIGIDSHRFKRALELPEVQKHIKDLEERFKHRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFYALCALYAVTDVALVTSLRDGMNLVSYEFVACQAKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDKALNMEPVERQNRHKHNFEHVTQHTAQEWAETFVSELNDTVVEAQLRTKQAPPRLPTKTAIERYLQSSNRLLILGFNGTLTEPVEKRGDQFKEMELTVHPELKQPLKELCSDPKTTIVVLSGSGRAVLDQNFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSLKHVFLYFRERTPRSCFEEREASLVWNYKHADVEFGRVQARDMLQHLWTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLAKQDEDIYAFFEPELPSSGAAHSRSKVTDGIKFPGEKPSLKIPPNKNGTKSSQNKAQRPAPNSEKKPTNHVCRAPRRPAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVAFLKELAGASSNSLFQST* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2234 927 Gene3D Glycogen Phosphorylase B; 336 538 - -
Amo07g2234 927 MobiDBLite consensus disorder prediction 835 855 - -
Amo07g2234 927 MobiDBLite consensus disorder prediction 808 868 - -
Amo07g2234 927 SUPERFAMILY HAD-like 586 916 IPR036412 -
Amo07g2234 927 Pfam Trehalose-phosphatase 592 820 IPR003337 GO:0003824|GO:0005992
Amo07g2234 927 Gene3D Glycogen Phosphorylase B; 81 335 - -
Amo07g2234 927 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 557 - -
Amo07g2234 927 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Amo07g2234 927 Gene3D - 589 770 IPR023214 -
Amo07g2234 927 CDD HAD_TPP 587 805 - -
Amo07g2234 927 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 25 916 - -
Amo07g2234 927 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
Amo07g2234 927 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 25 916 IPR001830 GO:0003824|GO:0005992
Amo07g2234 927 MobiDBLite consensus disorder prediction 1 21 - -
Amo07g2234 927 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
Amo07g2234 927 Gene3D - 676 756 - -
Amo07g2234 927 TIGRFAM T6PP: trehalose-phosphatase 585 799 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2234 Amo-Chr7 67474661 67488063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2234 10 921 Trehalose Biosynthesis Gene Families AT1G78580 76.882 0.0 1452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2234 K16055 - gmx:100820010 1561.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1937 18 45304769 45318051 Amo07g2234 07 67474661 67488063 hybridization