Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2219 ATGGAGCCTCAAATTGCTGCTCTCTGCCCCAAGTCAACGCTCACTGCTGCCGCTTTTCCTGTCCACATCCCAGATCACCAGCTATTAACAGCTGTAGAAGGCCGTACATTTTCGACCTTCAAGGAGCCAAAAGTACTTGGTCTGTTTCCACCCCTACCACACGTGGGTGCTCTAGAATCTGAAATAGATTTGTTGTCACCTCACTGTGCGATCACTCACTCAATGTCTACAGCACCTCTCTTCAGTCACGAGCGTCACCTCTCCCCCTTAAAATATTACAGAATAACTCCTCTCTTCTCTTCTGCACAGGTTTTCCTATCCGATTGGTGGCTTGCCAAGCCTTGCCTTCCACTCCAGGGCTTAGCGGTTGGTGGCATTGCTTATGGCCTGAGAGAGAGAATGTTCTTATCGACAGTGATTGCAAAGAGGCACGAGGCGAATGTCTTGGAGACCGAAGACGGAGTCACTCTTCACTTAAATAGTTTCATTAACAGCTCCCGCTCATCTCAGAATGGCTTCCCGCGCAAGGTATGCRAAGACTTCTTGTTGGGATTTCCAGACGATTGGCAAAAGTACACTGCTCATAGTTTTGGAGCTAAATGTGTCAATGGGGATACTGGATTTCATGAGCCAAATGCTTGTTCACGCAAGAGGGCTGTTGATGCTATCCCATTTTCCATTCATGATAATCGTTCAGCAGAGAGACATGATTTTTCATCGTCCAATGATGGAATTCTGAAAGCAAAAACGAATATCTGCAATGAACCAGAGAATTCAATCGGCAATGTTTTGAAGCAATCTGTATCAAAAAATAGTGTGGAATGCAGCAATAGCAAGAAAACTGTGGAGGGTGAACGCGAGGACAATTCTGTAAGTCTTAAATCGTCTCAGTCACTTGTTGACACTAGGGACGATTGTGAAAATGGAGTCTTAGTAGCTGCACCTGTAAGCCAAGTTGGAAATCCAAACAGCGACCGATCTTTGACAGGTGTGTTTGACCGGATTCCATGTAAAGTTCATTCTGGGAAAAGCATGGTTGGATCTCCAGTTTCCACAACAAAAATCAGAGCAACACAATCATTGGGTGACTGCAAGGAGGAATATGTTAGTCACAATAGAAAATATTCGAAAAAAAGTCTCACGTCACTCAAAGAAACCAGTACTTGTCCAGTTAGAAGATCTCCCAGGCTGTCAAAGGCAACGAAATGA 1209 0.4475 MEPQIAALCPKSTLTAAAFPVHIPDHQLLTAVEGRTFSTFKEPKVLGLFPPLPHVGALESEIDLLSPHCAITHSMSTAPLFSHERHLSPLKYYRITPLFSSAQVFLSDWWLAKPCLPLQGLAVGGIAYGLRERMFLSTVIAKRHEANVLETEDGVTLHLNSFINSSRSSQNGFPRKVCXDFLLGFPDDWQKYTAHSFGAKCVNGDTGFHEPNACSRKRAVDAIPFSIHDNRSAERHDFSSSNDGILKAKTNICNEPENSIGNVLKQSVSKNSVECSNSKKTVEGEREDNSVSLKSSQSLVDTRDDCENGVLVAAPVSQVGNPNSDRSLTGVFDRIPCKVHSGKSMVGSPVSTTKIRATQSLGDCKEEYVSHNRKYSKKSLTSLKETSTCPVRRSPRLSKATK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2219 402 Pfam SANTA (SANT Associated) 104 192 IPR015216 -
Amo07g2219 402 PANTHER MIS18-BINDING PROTEIN 1 96 366 IPR039110 -
Amo07g2219 402 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 96 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2219 Amo-Chr7 67166671 67169528 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo07g2219 SANTA 5.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2219 - - adu:107478102 523.857