Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2206 ATGCAGCAAGATCAGCTCAAGAAGGACATGAAAGAGTTGGACTTCTTCACCGACTATGGGGATGCCAACAGATACAAGATTCTTGAAGTTATAGGGAAGGGTAGCTATGGAGTTGTCTGTGCAGCAATTGACACACACACTGGGGGGAAAGTTGCAATAAAGAAGATTAATGATGTTTTTGAGCATATATCCGATGCCATTAGAATCCTGCGCGAGGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGATATTAAGCGGATCATGTTGCCACCTTCAAAGAGAGATTTTAAGGATATTTATGTGGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACCCGCGAACACCATCAATTTTTTCTTTATCAGATGCTACGTGCTTTGAAGTATATGCATACAGCAAATGTGTATCACAGAGACCTTAAGCCCAAGAACATACTGGCTAATGCAAACTGCAAGCTCAAAATTTGTGATTTTGGACTTGCCAGAGTTGCATTCAATGATGAACCAACTGCAATATTTTGGACGGATTATGTTGCTACTAGATGGTACAGAGCCCCTGAGCTGTGTGGATCGTTCTCATCTAAGTATACACCAGCGATTGATATATGGGGCATAGGATGCATTTTTGCTGAGGTGCTAACAGGAAAACCGTTGTTCCCTGGCAAAAGTGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCCGAAGTTATTGCAGGAGTTCGAAATGAGAAGGCAAGGAAGTACCTCACAGAAATGCGGAAGAAACCTCCTGTGCCATTTGAAAAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTACTGCAAAGGCTTTTAGCATTTGATCCAAAGGAGCGGCCAACTGCCCAAGAGGCACTAGCTGATCCTTTCTTCAAGGGTTTGGCCAAAGTTGAGAGAGAGCCGTCATGTCAGCCAATTTCAAAATTGGAATTTGAGTTTGAGAGGAGAAGATTGAATAGGGAGGATGTTAGAGAACTACTATATCGAGAGATTCTGGAGTATCATCCTCAGCTTCTCAAAGATTACATGAATGGAATGGAAGGGACAAATTTCGTCTATCCTAGTGCCATAGATCATTTGAGGAAGCAATTTGCTTATCTTGAGGAAAACCATGGTAAAAGTGGCCCTGTGATTCCTCCGGAGAGGAAGCATGCTTCCCTTCCAAGGTCCACGGTACATTCTAGTACATTTACTCCTAGTGCCCAGCCATCATTCCCTCCGAATGAGAACAAGCAAATTGCAGAAGATGCATCTAAGATTTCGAGAGCTGCCGGAGAATCTAATTCAACCAGTCATATAATAAGGCCTTCGAGACCTCCACCAAAGGTGCCAACAGCAAAACCGGGTAGAGCTGTAGGGACGACTGTTTCATACTATGATAGTGGGAGAAACATGAAAGACAATTATGACCCGAAGATGTTCTACCGAAATACTCTTCCTCAAGCAGTCTCTCCACACTTTTTCCAAAGGATGTGCCCTACAAACCCCAAAACGCCATCGGAGGCATACAAGGATGTTTCACAAGGCAAACACCAACTTCCATCCCAGCAGGGTAATGTGCCAGCGAGACTGGCTATAGATCTTAATACCAACCCATACTACCAGCACGGGAAGAGTGATCATGTCTCTGCCATTGATGCTAAGTTGATTCAAGCACAATCTCAGTTTGGTGCAGTTGGTGCTGCCGCAGTAGCCGTGGCTGCACACAGGCACTCGGGGTGCTTTTAG 1803 0.4398 MQQDQLKKDMKELDFFTDYGDANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKINDVFEHISDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDEPTAIFWTDYVATRWYRAPELCGSFSSKYTPAIDIWGIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPEVIAGVRNEKARKYLTEMRKKPPVPFEKKFPNADPLALRLLQRLLAFDPKERPTAQEALADPFFKGLAKVEREPSCQPISKLEFEFERRRLNREDVRELLYREILEYHPQLLKDYMNGMEGTNFVYPSAIDHLRKQFAYLEENHGKSGPVIPPERKHASLPRSTVHSSTFTPSAQPSFPPNENKQIAEDASKISRAAGESNSTSHIIRPSRPPPKVPTAKPGRAVGTTVSYYDSGRNMKDNYDPKMFYRNTLPQAVSPHFFQRMCPTNPKTPSEAYKDVSQGKHQLPSQQGNVPARLAIDLNTNPYYQHGKSDHVSAIDAKLIQAQSQFGAVGAAAVAVAAHRHSGCF* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2206 600 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2206 600 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Amo07g2206 600 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Amo07g2206 600 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 479 - -
Amo07g2206 600 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Amo07g2206 600 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 479 - -
Amo07g2206 600 MobiDBLite consensus disorder prediction 396 484 - -
Amo07g2206 600 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo07g2206 600 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2206 600 MobiDBLite consensus disorder prediction 414 436 - -
Amo07g2206 600 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2206 600 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Amo07g2206 600 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2206 Amo-Chr7 66992872 66998228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2206 1 600 MAP Kinase Gene Family AT1G53510 68.379 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo07g2206 Pkinase 9.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2206 - K04371 gmx:100800878 978.008