Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2177 ATGACTGCACAAGACAAACCCTCTACCGTCACATCCCATCACCACCACTCTCCTGCTCAGTCACCACCACCACCCCCCTCCAACGCCGCCGTCACATCCCACCACCACCACTCTTCACCGCCACCGCCCCCTCATTCCGCAGCGCCACCTCAGCCCTACCCTGCTGCTCAGTACGGCACCTTCCAAGGCGTCTCCAACTACCCTCCGCCTCCGCGGGATCCTCACCCAGCCATCGGGTTTCCCCACCCTGTTCCGCCGCCTGGCGCCGCTGACCACTCGGCTCCTCATCCTCCTTATTACCCTCATGGCTACCAAGCAGTTCCTGGTTATGCAGTTGCTGAAGGAAGACCTGTACGAGAAACCCGCCTTGGTTGCTGTGGTCTTGGTTGCGGCTGGTGCCTGTTTATATTAGGCTTCTTGCTTGCTGGTATTCCGTGGTATGTCGGAGCAATAATTATGCTCTGTTCCAGAGTAGACCATCGGGAGAAACCTGGATATGTTGCGTGTATAATTGCTGCTGTTCTGGCGACAATTGCTATTATTCTTGGCGTGACAAAGGGTGCAGATGACTGGGACTGGTAA 582 0.5653 MTAQDKPSTVTSHHHHSPAQSPPPPPSNAAVTSHHHHSSPPPPPHSAAPPQPYPAAQYGTFQGVSNYPPPPRDPHPAIGFPHPVPPPGAADHSAPHPPYYPHGYQAVPGYAVAEGRPVRETRLGCCGLGCGWCLFILGFLLAGIPWYVGAIIMLCSRVDHREKPGYVACIIAAVLATIAIILGVTKGADDWDW* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2177 193 MobiDBLite consensus disorder prediction 1 17 - -
Amo07g2177 193 MobiDBLite consensus disorder prediction 37 51 - -
Amo07g2177 193 MobiDBLite consensus disorder prediction 1 95 - -
Amo07g2177 193 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 29 191 IPR044804 -
Amo07g2177 193 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2177 Amo-Chr7 66361306 66364263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2177 45 191 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.171 2.09e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2177 - - adu:107459876 314.309