Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2124 ATGGACCTCAACACAAAACCGTTGGCAGAGTTGTTGGAAGTCGATGAAGCTGGCTTCCACTTGTGTAACGAGGTTGGTCATAGTGAATCAAACAACGATATAGGAGATCTCAGAACAACCGTTGATGAGGGTCCTGTTGGTGAGAATCCTAGGGAGGGTATGTGCTTCGGCGCTGATCCTGGCAATGAGGATCCCAGGGAGGGTATGTGCTTTGGCACTCTTCTTGAAGCGCGCAATTATTATCATCGTTATGCTGCAAAGATGGGTTTTGTAGCTAAAATAAGAAACACAAATTATGAGAAGCACAGCAAGGATAAGATTCCTATAAATCAATCCATACATTGCAATAAAGATGGCCATCGTATATCTCAGAAAAGGGCACCCAAGAGAGCAAAAACAATCACATCTGTAGGCTGCAAAGCACGTTGTTATGTAAGGTTAGACAAGTCCACAGGTCTATGGAAAGTTTCAAAGTTAGAATTGTCTCACACACACCCGCTTAATCCAAAGCCTTCAGCCATCCTCGAGAATAGAGAGCTCTTTCTGCACACGAAAGATCTGATACAGCGTAATGATGAAGTCGATAGACAACCCAACAAGACCTTTCAGGCATCGACCATGGATATGGATAGAAAAATTTCTAATCTCAATGCCATTCATCAGAGTCTTCTTACCCGCTGGACTGCTGAATCAGCCAGAGAACAGGGATCTTCATCAGCTACTCCTTCCGATGTCATAATTAAAGATGAGACCCCATTCCCGGTTAATAATCAAACTCCTTCCGATGTCATAATTAAAGACAAGTCCCCAATCCTGGTTAATATTCAAAATATTCCTGAAGAGCCATCGCCATCACCACTTCATTCTCTTCCAGAAAAGAATAGAAAAAAAGGCGAAGATACTGAGGCAGGTTGTGCTAGTGAAGTGGTGTCCGACCATGATTTTGGTTTCGTGTTAAAGAATACTTTTGATGCAGGTGGTTTTATCGACCAGTACCTTCTGAATTCATCAACTGTGGAGGTGTTGGAAAATATTCCTGCTAATGAGAACATTAGTAGGATGCAGCGAATGCTCCTAAAATCGGCAATCTTATGTCGCGACATGGAGAGGAGCTTTTCCGATTTGCAGAAGTTGAAGGAGAAGCTTGTTGCTAAAGAAAAAGAGATAGCTTTTCTCACTGCCCAAAATATTGAGCTATCGAGTAAAACTATTGAATTGTCTTCTCAAGTGTCAAGGTTAGTAGAGGAGAAAAAGACAATATCTTGTGACCTGAAAGCTTCTGAAAAGAAGGCCTCGGAGTTCAAGAGGAGCTTGGAGATTTCTAGGGACGAAATGGGTATTTTGAAGGATAACTATAAAAAACTTGGTATAGTAGTATTGGAGGGAGTGACTGATGTTGAGAAGAATATCAAGCAGCAAATTCAGTTGTTGGCTCCCAACTTGGATATTTCTAAAGTTGGGGCTTATCGTCATGTTGTAAACGGTCAAATTGTTGACCTTCTTAACTAG 1509 0.4162 MDLNTKPLAELLEVDEAGFHLCNEVGHSESNNDIGDLRTTVDEGPVGENPREGMCFGADPGNEDPREGMCFGTLLEARNYYHRYAAKMGFVAKIRNTNYEKHSKDKIPINQSIHCNKDGHRISQKRAPKRAKTITSVGCKARCYVRLDKSTGLWKVSKLELSHTHPLNPKPSAILENRELFLHTKDLIQRNDEVDRQPNKTFQASTMDMDRKISNLNAIHQSLLTRWTAESAREQGSSSATPSDVIIKDETPFPVNNQTPSDVIIKDKSPILVNIQNIPEEPSPSPLHSLPEKNRKKGEDTEAGCASEVVSDHDFGFVLKNTFDAGGFIDQYLLNSSTVEVLENIPANENISRMQRMLLKSAILCRDMERSFSDLQKLKEKLVAKEKEIAFLTAQNIELSSKTIELSSQVSRLVEEKKTISCDLKASEKKASEFKRSLEISRDEMGILKDNYKKLGIVVLEGVTDVEKNIKQQIQLLAPNLDISKVGAYRHVVNGQIVDLLN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2124 502 Coils Coil 368 395 - -
Amo07g2124 502 MobiDBLite consensus disorder prediction 290 304 - -
Amo07g2124 502 Pfam FAR1 DNA-binding domain 79 169 IPR004330 -
Amo07g2124 502 Coils Coil 424 444 - -
Amo07g2124 502 MobiDBLite consensus disorder prediction 230 261 - -
Amo07g2124 502 MobiDBLite consensus disorder prediction 230 245 - -
Amo07g2124 502 MobiDBLite consensus disorder prediction 276 304 - -
Amo07g2124 502 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 272 - -
Amo07g2124 502 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 45 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2124 Amo-Chr7 65137624 65142168 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g2124 FAR1 8.7e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2124 - - adu:107459405 908.672