Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2108 ATGGCATTATTGGAAAATTGGTTCCTCATGATCATGGTGATGGTGTTTTTCCATGGCATAGTGTTTGTGAGTTCAATCAATGAAGAAGGTTCAAGCCTTTTGCAGTTCAAAAGTTCCCTTTTTGATGCAAATAACAAGCTTCACAATTGGGATTCTTCTGACTCCACACCATGCAATTGGACTGGTGTGCAATGCACCCATTCATCATTGGTAACTTCTGTTAAACTCTACCACCTTAATCTTTCTGGCACTTTATCTCCTAGAATCTGTGACCTTCCAAGGCTAATTGAGTTGAATCTCTCAAAGAATTTCATTTCTGGTCCAATTCCTGATGGTTTTGCTAATTGCCATAGTTTGGAGATTCTAGATCTTTGTACAAACAGGCTCCATGGAGAAATTCTAACCCCAATTCGGAATATAACAAAACTTAGGAAGCTTTACCTTTGTGAAAATTATATGTATGGTGAGGTACCTGAAGATCTTGGGAGCTTAGCTTCACTTGAGGAGTTAGTTATATATAGCAACAACTTAACTGGGATCATTCCTAAATCAATTAGCAAGTTGAAGAAGCTTAGGGTTATTCGGGCGGGACTGAATGCTCTCTCAGGGCCAATACCAGCTGAGATTAGTGAGTGTGACAGCTTGGAGACATTGGGTTTGGCGCAGAATCAGCTAGAAGGTTCTATTCCAAGAGAGCTTCAAAAGCTTCAGAACCTTACCAACTTGATTCTATGGCAAAACTCACTGTCCGGGGAGATTCCTCCCGAGATTGGGAACATTAGTAACCTGCAATTGCTTGCTTTGCATATGAATTCGTTCATTGGTGATGTCCCGAAGGAGCTCGGAAAATTGTCGCAGTTGAAGAGGTTGTACATATACACCAACCAGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAATGCTATTGAGATAGATTTTTCGGAGAACCGTTTGGTTGGGTTCATTCCCAAAGAGTTGGGGAAGATGTCTAATCTTACCCTGCTTCATTTGTTTGAAAACCATTTGGAGGGTCATATTCCTCATGAGCTCGGCCAATTGAAGCAGCTAAAGAATTTAGACCTTTCAATGAATGAGTTAACAGGTACAATTCCATTGGAGTTTCAAAATCTTTCATTGATGGAGGATTTGCAGCTATTTGACAATAAGCTTGAGGGAACAATTCCTCCTCATCTTGGGGCCATTAAGAACCTTACAATTCTCGATATGTCCTCGAATAATTTTGTTGGTCCAATACCTGTTCATCTATGTCAATATCAGAAGCTGCAGTTCTTGAGCCTTGGGTCGAATCGGCTGTCCGGAAATGTTCCCTATAGGCTGAGGACTTGCAAATCTCTTGGGCAGCTAATGTTGGGGGACAACATGTTGACAGGAAGTTTACCAGTTGAGTTGTATGAACTTCACAATCTTACTGCACTCGACCTTAAACAGAACCGATTTTCCGGGCTGATAAGCCCAGGGATAGGTCAATTAAAGAAATTGGAAAGGCTTCTCTTGTCGGATAATCATTTTGAAGGTTATCTCCCTTCTGAGATTGGAAATTTATCACAACTTGTCGCGTTCAATATTTCCTCCAACAGTTTCAGTGGAAGCATTCCACGTGAATTGGGAAACTGTGTAAAGCTACAGAGGCTTGATCTTAGCAGGAACAACTTCACTGGTGAGCTTCCAGAAAAAATTGGCAAGCTGGTGAATCTGGAGCTGTTGAAAGCTTCCGATAATAGGCTCTCTGGTGAAATACCTGGCAGTTTGGGGAATCTTATTCGCCTCACGGAGCTTGAGCTAGGTGGCAACCTATTCTCAGGAAGCATCCCTTATCATTTGGGAGGACTTACTTATGTTCAGATTGCACTTAACTTGAGCCACAACAATCTTTCTGGTACGATTCCTATAAGCTTGGGGAACTTGCTAATGTTGGAATCACTTTACTTAAACGACAATCAACTCATTGGTGAGATTCCTGAATCAATCGGTAGCCTTCCTAGCCTTATAGTATGCAATGTCTCCAACAACAAGCTGGTAGGAACTGTTCCAGATACACCTGCATTTAGAAAGATGGATTTCTCAAATTTTGCCGGGAACAATGGGTTATGCCGATTAGGTACTTATCATTGTCATCCACCTGTATCTTCAACTCATTCAGCGAAAGCGAGCTGGATCAGAGATGGTTCAACTAGGGAAAAGATAGTTAGCATTGTTTCTGGTGTGGTTGGATTTGTTTCTCTTATTTTCATAGTAGGTATATGTTACGCCATGAGGCAGCGTAGCCCTGCCTTTGTCTCGCTTGAAGGGCAAACAAGACCTCATGTCACTGATAACTATTATTTTCCGAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACTGGAAATTTTGCAGAATCAGCGGTTATAGGAAGAGGAGCTTGTGGCACTGTCTACAAGGCTATTATGAATGACGGCGAAGTGATTGCAGTGAAAAAGCTGAATTCTCGAGGAGATGGAGCAAACGTTGACCGAAGCTTCCTTGCTGAGATTTCAACCCTTGGAAAAATCAGGCATAGGAACATTGTGAAGCTGCATGGATTTTGTTATCACGAGGATTCGAATCTTCTCTTATATGAATACATGGAAAATGGAAGCCTTGGGGAACAACTTCACTCAAATTCAAGCAGGTGTGTGCTGGATTGGAGTGATCGATATAAAATTGCTTTGGGAGCAGCAGAAGGCCTATGCTATCTTCATTTTGATTGCAAACCTCAAATCATTCATCGCGATATAAAATCAAACAACATATTGCTTGACGAATTGTTTCAGGGTCATGTTGGAGACTTCGGCTTGGCAAAGTTGATTGATTTTTCCTACTCGAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCCCCAGAGTATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGCTTCGGGGTAGTTTTGCTAGAACTAGTCACTGGGAGGTCACCTGTTCAACCATTGGAACAGGGCGGCGATCTAGTGAGTTGGGTGAGAAGGTCGATTCAAGCTTCAGTACCAACATCTGAACTGTTTGACAAGCGATTGAATCTGAGCGTGCAGAGAACAATGGACGAGATGTCTCTTATTCTGAAAATCGCTCTGTTTTGCACCAGCACGTCCCCACTTACTAGGCCAACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGAGAATATGTCAGCAATTCACCATCCACTCCTACATCGGAATCTCCACTTGATGAAGGTTCTTCTTCTAAAGGTTAG 3312 0.4218 MALLENWFLMIMVMVFFHGIVFVSSINEEGSSLLQFKSSLFDANNKLHNWDSSDSTPCNWTGVQCTHSSLVTSVKLYHLNLSGTLSPRICDLPRLIELNLSKNFISGPIPDGFANCHSLEILDLCTNRLHGEILTPIRNITKLRKLYLCENYMYGEVPEDLGSLASLEELVIYSNNLTGIIPKSISKLKKLRVIRAGLNALSGPIPAEISECDSLETLGLAQNQLEGSIPRELQKLQNLTNLILWQNSLSGEIPPEIGNISNLQLLALHMNSFIGDVPKELGKLSQLKRLYIYTNQLNGTIPPELGNCTNAIEIDFSENRLVGFIPKELGKMSNLTLLHLFENHLEGHIPHELGQLKQLKNLDLSMNELTGTIPLEFQNLSLMEDLQLFDNKLEGTIPPHLGAIKNLTILDMSSNNFVGPIPVHLCQYQKLQFLSLGSNRLSGNVPYRLRTCKSLGQLMLGDNMLTGSLPVELYELHNLTALDLKQNRFSGLISPGIGQLKKLERLLLSDNHFEGYLPSEIGNLSQLVAFNISSNSFSGSIPRELGNCVKLQRLDLSRNNFTGELPEKIGKLVNLELLKASDNRLSGEIPGSLGNLIRLTELELGGNLFSGSIPYHLGGLTYVQIALNLSHNNLSGTIPISLGNLLMLESLYLNDNQLIGEIPESIGSLPSLIVCNVSNNKLVGTVPDTPAFRKMDFSNFAGNNGLCRLGTYHCHPPVSSTHSAKASWIRDGSTREKIVSIVSGVVGFVSLIFIVGICYAMRQRSPAFVSLEGQTRPHVTDNYYFPKEGFTYQDLLEATGNFAESAVIGRGACGTVYKAIMNDGEVIAVKKLNSRGDGANVDRSFLAEISTLGKIRHRNIVKLHGFCYHEDSNLLLYEYMENGSLGEQLHSNSSRCVLDWSDRYKIALGAAEGLCYLHFDCKPQIIHRDIKSNNILLDELFQGHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRSIQASVPTSELFDKRLNLSVQRTMDEMSLILKIALFCTSTSPLTRPTMREVIAMLIDAREYVSNSPSTPTSESPLDEGSSSKG* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2108 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Amo07g2108 1103 SMART LRR_typ_2 596 620 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 164 187 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 548 572 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 332 356 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 645 669 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 500 524 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 92 115 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 236 260 IPR003591 -
Amo07g2108 1103 SMART LRR_typ_2 284 308 IPR003591 -
Amo07g2108 1103 Pfam Protein kinase domain 804 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2108 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 1086 - -
Amo07g2108 1103 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Amo07g2108 1103 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515
Amo07g2108 1103 Pfam Leucine Rich Repeat 648 669 IPR001611 GO:0005515
Amo07g2108 1103 Gene3D Ribonuclease Inhibitor 283 450 IPR032675 -
Amo07g2108 1103 Gene3D Transferase(Phosphotransferase) domain 1 880 1092 - -
Amo07g2108 1103 MobiDBLite consensus disorder prediction 1083 1103 - -
Amo07g2108 1103 ProSiteProfiles Protein kinase domain profile. 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2108 1103 SMART serkin_6 802 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2108 1103 SUPERFAMILY L domain-like 28 309 - -
Amo07g2108 1103 SUPERFAMILY L domain-like 568 709 - -
Amo07g2108 1103 SUPERFAMILY Protein kinase-like (PK-like) 779 1075 IPR011009 -
Amo07g2108 1103 Gene3D Phosphorylase Kinase; domain 1 771 879 - -
Amo07g2108 1103 SUPERFAMILY RNI-like 249 563 - -
Amo07g2108 1103 Gene3D Ribonuclease Inhibitor 183 282 IPR032675 -
Amo07g2108 1103 Gene3D Ribonuclease Inhibitor 589 714 IPR032675 -
Amo07g2108 1103 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Amo07g2108 1103 PANTHER OS07G0152200 PROTEIN 12 1086 - -
Amo07g2108 1103 Gene3D Ribonuclease Inhibitor 451 588 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2108 Amo-Chr7 64681029 64684779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2108 51 1079 Receptor kinase-like Gene Family AT1G73080 37.407 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo07g2108 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2108 - - gmx:100818311 1768.05