Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2096 ATGTTGAACCAAACCACCAACAAGATTCTGAAGCTTCTGTGGACACAAGGTGTGTGGAAGATGTATGGTTCCATGCCGAGGGATTTTTGTGATGAGTATGGTGCTGTTGGTCCTAATGCGAAATGTGACATGACTGAGTCTCCAAATGTTTGTGAATGTTTGAGAGGGTATAGGCCTAAGTCACCAGAAGAATGGATCAGAACGAATTACGAAGGAGGTTGCTTGCGCGCCAAGAATCTGAATTGCGAAAGCGATGGGTTTATCAAGTATGTTAAGATGAAATTCCCTGATACTGAGAATTGTTGGTACTTGAATCAGAGTATGAACTTGGTTGAGTGCACAGACAAGTGCTTGAGGAATTGTTCTTGTATGGCTTATGCGAATTCGGATATTCGAGGAGAAGGCAATGGTTGTGCTTTGTGGTTTGGTGATCTTAATGATTTGAGAGTTCAACCAGATGCAGGGCAAGATCTTTATGTTAGAGTCCCTTCTTCAGAGTTAGAGAATTTAGCAATGATGGATAGTTTCATTGAAGAACAAGACGGGCATCTAGAGCTTCCATTGTTTGATCTATCTAGTTTAGCTAATGCTACTGGTAACTTTTCAGTAAAAAACAAGGTTGGAGAAGGTAGTTTTGGACCTGTATACAAGGGATTATTGAAAAATGGGCAAGAAATTGCTATTAAAAGACTTTGTAGAGGTTCTGTACAAGGGCTTAAAGAAATCAAAAATGAAATTGCATTGATTGTCAAACTTCAACATCGTAATCTTGTGAAACTTCATGGATGTTGCATTCACAATGAAGAGAAAATGCTTGTATATGAATACATGCCCAACAAAAGTTTGGATTTCTTAATATTTGATCAAACACAGAGAAAGTTCTTGGATTGGTCGAAGTGTTTTCGTATGATTTTTGGGATTGCAAAGGGTCTCCTTTATCTTCATCAAGATTCAAGAGTTAGAATCATTCACAGAGAAAATTTTGGGAGGAGACCAAATTGCAGCGACGCGACGGGTGGTTGGAACATAATACTATCTGGAAAGAAAAACAAAGGAAATAATTGGGAAAATGAAAGCGCAGATCTTATTGGCTATGCATGGGACTTGTGGACTAAAGAAAGGCCTCTAGAAATTGTTGATGATATCCTAATAGAGTCTTGTAACCTCTCTCAAGTATTGAGGTGCATTCAGATCAGTCTTCTCTGTTTGGAGCAACATCCATATGATAGACTAGACATGTCATCAGAATTGCCTTGCCTAAGCCAAAACAACCTACTTTATTTATTGGAGAATATGCATATCAATATGATTCTGCCAACGAATTAA 1326 0.3839 MLNQTTNKILKLLWTQGVWKMYGSMPRDFCDEYGAVGPNAKCDMTESPNVCECLRGYRPKSPEEWIRTNYEGGCLRAKNLNCESDGFIKYVKMKFPDTENCWYLNQSMNLVECTDKCLRNCSCMAYANSDIRGEGNGCALWFGDLNDLRVQPDAGQDLYVRVPSSELENLAMMDSFIEEQDGHLELPLFDLSSLANATGNFSVKNKVGEGSFGPVYKGLLKNGQEIAIKRLCRGSVQGLKEIKNEIALIVKLQHRNLVKLHGCCIHNEEKMLVYEYMPNKSLDFLIFDQTQRKFLDWSKCFRMIFGIAKGLLYLHQDSRVRIIHRENFGRRPNCSDATGGWNIILSGKKNKGNNWENESADLIGYAWDLWTKERPLEIVDDILIESCNLSQVLRCIQISLLCLEQHPYDRLDMSSELPCLSQNNLLYLLENMHINMILPTN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2096 441 PANTHER - 12 326 - -
Amo07g2096 441 ProSiteProfiles Protein kinase domain profile. 201 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g2096 441 Pfam S-locus glycoprotein domain 14 61 IPR000858 GO:0048544
Amo07g2096 441 Pfam Protein tyrosine and serine/threonine kinase 203 326 IPR001245 GO:0004672|GO:0006468
Amo07g2096 441 Gene3D Transferase(Phosphotransferase) domain 1 277 326 - -
Amo07g2096 441 SMART ntp_6 82 162 IPR003609 -
Amo07g2096 441 CDD PAN_AP_plant 79 163 - -
Amo07g2096 441 SUPERFAMILY Protein kinase-like (PK-like) 184 325 IPR011009 -
Amo07g2096 441 ProSiteProfiles PAN/Apple domain profile. 82 163 IPR003609 -
Amo07g2096 441 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 344 420 - -
Amo07g2096 441 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 12 326 - -
Amo07g2096 441 PANTHER - 344 420 - -
Amo07g2096 441 Gene3D Phosphorylase Kinase; domain 1 165 276 - -
Amo07g2096 441 Pfam PAN-like domain 82 148 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2096 Amo-Chr7 64350721 64353008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2096 189 425 Receptor kinase-like Gene Family AT4G23230 38.754 5.13e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g2096 PK_Tyr_Ser-Thr 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2096 - - adu:107462330 712.22