Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2088 ATGAGCGGCGAAATCGTGCCGGTAGAGGAAGCAAAAGCGATAGATTTGTTTGCCGCAGATGCGGACCTAGATGCAGAAGCAGCAGTGAGGATTGTTGACGGGATAGGGTCCTTTGGCGCAATTGAATTTTCTTCCCTAACAGCCAAGGACGTTCTTACGACGGAGTTCACAAGCCTACAGGGAGCTTATGACTACTACAACGAATACGGTCGCATCAAGGGATTCTCGATCAGGAGGTCCAAGGTGGGTCGCAGAACAAAACAGGGGGCAGAGGGCGAAATTATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGAGACGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCACGGATTAAGGTCCACGTTGATGATGCTAGCGGGCAATGGTTTGTTGAACAATTCTGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTCAGGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAGGCGATTTGCACCAAATCAATTCCATGATGAAATCTGGGTTGCGAGTGCCGACGATTTTCCACGCCTTTGCCAATCAGTCAGGAGGATTCGAGACTGTTGGAATATGGACGGACAGCGTGGCAGACCACATGTTGGAGGATCATCCCTGGATAGTGGACATGTATGCAAAGAAGCATTCATGGTCTAATGCCCATATCCAGGGGAAATTCTTCGTGGGACTGAAGACGACATCGAGGTGCGAGGCTTTGAATATGCAGCTTAGAAAATTTATACACAATGGGTATAATCTGAGGGAGTTTGTGGAGCACTTCCAACACTCTTTGGAATTCATGAGGAGGAGAGAACTAGTGGCAGACTACAAGTCTGCGTCGGCGAGCTTATTGTAA 909 0.4983 MSGEIVPVEEAKAIDLFAADADLDAEAAVRIVDGIGSFGAIEFSSLTAKDVLTTEFTSLQGAYDYYNEYGRIKGFSIRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQREDRKMDPRPITRCGCEARIKVHVDDASGQWFVEQFCDNHNHPMLDARFRGLSRSHRAVKEGDLHQINSMMKSGLRVPTIFHAFANQSGGFETVGIWTDSVADHMLEDHPWIVDMYAKKHSWSNAHIQGKFFVGLKTTSRCEALNMQLRKFIHNGYNLREFVEHFQHSLEFMRRRELVADYKSASASLL* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2088 302 PANTHER OS02G0262500 PROTEIN 50 212 - -
Amo07g2088 302 PANTHER OS02G0262500 PROTEIN 217 297 - -
Amo07g2088 302 Pfam FAR1 DNA-binding domain 64 158 IPR004330 -
Amo07g2088 302 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 212 IPR031052 GO:0006355
Amo07g2088 302 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 217 297 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2088 Amo-Chr7 64027797 64029284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g2088 FAR1 9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2088 - - aip:107633138 377.096