Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g2002 ATGGAGAAGGAGAAAGGGACTATCACTACGACCAACAATAATAACAAGATAGAGAGGGGGCACCAGATGTACCGTGAGGGGCGTTACAGGGAAGCATTAGGGTTTTACACGGACGCGATCGCCCTCGCTAAAACCAAACCCCACAAGATCGCTCTCCACAGCAATCGCGCTGCTTGTTACCTCAAACTTCACCATTTCAAAAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATCAAAACCACAGTGGGGCATTGATGCTGAGGGCTCAAACACTAGTCACCTTGAAGGAGTACCATTCAGCGCTTTTTGATGTCAATAGACTTTTAGAGTTGAACCCATCCTCAGAAGTATATCAAAATCTTCACGCTCGCTTGAAGACACAGTTGACACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAGCAGGAAGAAGAATCAGAAGACAGTCCTGAGGTCTTACTAGGAGGAGAGAATAATGAGGAATCAATGGGAGGTAAGTACTTGGCAACTTCGGATATTAGAATTGATCAGAAGGTTGAACTCCGGAAAGATATCGTAAGTGCTGAATGTGCTTCTCAAGATACAAAATCCAAGTTCCCATCCAAAGATGGAAGAGACCAGAACAGTGAGGCTGAAAAGTCAAAAGCAGAGGCTGTAGCACCTAAAGCACTGAACAGGGAATCAACCGAGCAACAAACGAAAGGATGGCAAATGATTCCAAAACCGAAAGGGCATTCAGCTCTGGACTATGCACGATGGGACAGTGTTGAAGATGATTCTAGTGAAGACGACGACGACAATGAAGATGAAGAATCTTTGCCACAGTACCGGTTCCGCGTAAAAACGGTGGGGGTACGGCCTGTCAAGTGA 882 0.4603 MEKEKGTITTTNNNNKIERGHQMYREGRYREALGFYTDAIALAKTKPHKIALHSNRAACYLKLHHFKKAAEECTSVLELDQNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLTLAPIPESEEEFEEQEEESEDSPEVLLGGENNEESMGGKYLATSDIRIDQKVELRKDIVSAECASQDTKSKFPSKDGRDQNSEAEKSKAEAVAPKALNRESTEQQTKGWQMIPKPKGHSALDYARWDSVEDDSSEDDDDNEDEESLPQYRFRVKTVGVRPVK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g2002 293 MobiDBLite consensus disorder prediction 138 155 - -
Amo07g2002 293 MobiDBLite consensus disorder prediction 138 171 - -
Amo07g2002 293 MobiDBLite consensus disorder prediction 200 224 - -
Amo07g2002 293 SMART tpr_5 50 83 IPR019734 GO:0005515
Amo07g2002 293 SMART tpr_5 84 117 IPR019734 GO:0005515
Amo07g2002 293 Gene3D Tetratricopeptide repeat domain 9 133 IPR011990 GO:0005515
Amo07g2002 293 SUPERFAMILY TPR-like 17 130 IPR011990 GO:0005515
Amo07g2002 293 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 12 293 - -
Amo07g2002 293 MobiDBLite consensus disorder prediction 195 282 - -
Amo07g2002 293 MobiDBLite consensus disorder prediction 260 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g2002 Amo-Chr7 61138337 61142426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g2002 14 131 Calmodulin-binding Proteins AT3G25230 32.308 1.99e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g2002 - - aip:107613864 502.671