Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1997 ATGCCCCTCTCTACTATGGCTTCTTCAATCCCTCATCATCAGTTCTATTCAAACTACACGTTCACTACCGATCTTGTTGATTTTCCTTATCATGCACCCAACAATAACAACAACAACGCTTCATCAATCATTATGGACAATTTCGCTATATGGGGTAGTGGTCAAGATTGCTTCTTCATTAACAACCACAACAACACCACCAACTCTTTGATTATTGATAATGAAGCACTTGATTGTGACGCCATGAATTCTTCTTCTTGGGTAGTGCCAAGTTTCGCGGAGCAACTTGGCGGCGGTGGTGTTTTATCCGATATGGCTGTGCCGGCCATCTCTGACTGTAAAATGGGCTTCTATGGCGGCGCCACTGCCGGATTTCAAGACTTCAGCAGCGGCTACCGGTCTGGTCTTGGCGATTTCGGAGAAGAATGTTGTGGTTTCAAGGAGGATATTAAACCGCCTACTTATTCTAACGCTACAAGAGAGAATTGGGGAATTCAAGGAAATCAAATGCCAGCAATTGAAGAACCTAACATAAAGGTAGGAAGGTACTCAGAGGAAGAAAGGAAGGAAAGGATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGCCGGAAAACGTTAGCCGATAGGCGAGTTCGAGTTCGGGGAAGGTTTGCAAGGAACAATGAGCTGTTATGTGAGGAAGACATGGCTACAAAGAAGAATGAGAATCATCATCATCATCATCATCATGATTTGAAAGAAGAGTTTTATGGTGGTGAATCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGTTGCAAGAAGCCATGGCAAGTTTGGTCTATTTATCTCACTCTTCACCAGAAGACATGTAG 888 0.4245 MPLSTMASSIPHHQFYSNYTFTTDLVDFPYHAPNNNNNNASSIIMDNFAIWGSGQDCFFINNHNNTTNSLIIDNEALDCDAMNSSSWVVPSFAEQLGGGGVLSDMAVPAISDCKMGFYGGATAGFQDFSSGYRSGLGDFGEECCGFKEDIKPPTYSNATRENWGIQGNQMPAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELLCEEDMATKKNENHHHHHHHDLKEEFYGGESIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1997 295 PANTHER ACTIVATOR OF SPOMIN::LUC2 6 290 - -
Amo07g1997 295 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Amo07g1997 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 290 - -
Amo07g1997 295 Pfam CCT motif 188 230 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1997 Amo-Chr7 60649634 60652069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1997 184 232 C2C2-CO-like Transcription Factor Family AT5G57660 51.020 5.16e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo07g1997 CCT 9.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1997 - - gmx:102660475 364.77