Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1986 ATGGGGGTTAATGAAGATTTGATGATGAAGGATGATTCATATGCATCATCAGTGATGGAGGAAGAGGATGATGTTCCACTTCCAGGGTTTAGATTCCACCCAACAGATGAAGAACTTGTGAGTTTCTATCTAAAGAGGAAGCTTGACAAGAAACCAATCAGCATCGAACTCATCAAACAGATTGATATCTACAAGTATGATCCTTGGGATCTTCCAAAAGCGAGTGGAAGTGGAGGAGAGAAGGAAGGTTACTTCTTTTGCAAGAGAGGGAGGAAGTATAGGAACAGCATAAGGCCTAACAGAGTCACCAGTTCCGGCTTCTGGAAAGCAACCGGGATAGACAAGCCGGTATACTCCCATGGAGGCGAAGGAACCGACTGCATTGGACTCAAGAAGACGCTTGTCTACTACCGCGGCAGCGCCGGTAAAGGTACCAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCTTCTGCCACAACCGAAAACAACACAAGCCTACTTGCCAACAACAAGAATAATAATAATATCAACAATGCCGATGTTGCCCAAGAAGCTGAAATCTGGACATTGTGTAGAATATTCAAGCGAAATGTGTCACAAAGGAAGCACACAGCAGACTTGAGATCACATTTAGTAACAGCTAATAGTAACAAGCACAAAACCACTAGAACCCATGTTGTTCAATCCAATAATAACAATATTAATCAACATCAAGAATCTTACATCAACTTTGGTGCAACAATCATTGGCCATCACCATTACCATCATCAAAATGAACAGAAGCCAGTGACTAACTACACAGCATGCAATAACAACACTGATCAAATCCAAAGGAACAATAGCAATCATCATCATCATCATCAGTTGAACTATCACCCTTCTTCAGCGGTGGCTACTACTGTGCCACAGCAACAACAACAACAATATCATCATCATCATCAGCTAATGACGGCTCCAGCTTCTAACATGTGGATTAATCCTTCTGCGATGAACGATTTGTTTGCATTTGATGATAACTGGGATGAGCTTGGATCCGTTCTCAAATTCGCTGTTGATACCCCTAGCTTGTAA 1074 0.4236 MGVNEDLMMKDDSYASSVMEEEDDVPLPGFRFHPTDEELVSFYLKRKLDKKPISIELIKQIDIYKYDPWDLPKASGSGGEKEGYFFCKRGRKYRNSIRPNRVTSSGFWKATGIDKPVYSHGGEGTDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSATTENNTSLLANNKNNNNINNADVAQEAEIWTLCRIFKRNVSQRKHTADLRSHLVTANSNKHKTTRTHVVQSNNNNINQHQESYINFGATIIGHHHYHHQNEQKPVTNYTACNNNTDQIQRNNSNHHHHHQLNYHPSSAVATTVPQQQQQQYHHHHQLMTAPASNMWINPSAMNDLFAFDDNWDELGSVLKFAVDTPSL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1986 357 Pfam No apical meristem (NAM) protein 28 156 IPR003441 GO:0003677|GO:0006355
Amo07g1986 357 Gene3D NAC domain 35 202 IPR036093 GO:0003677|GO:0006355
Amo07g1986 357 ProSiteProfiles NAC domain profile. 26 197 IPR003441 GO:0003677|GO:0006355
Amo07g1986 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 316 - -
Amo07g1986 357 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 16 316 - -
Amo07g1986 357 SUPERFAMILY NAC domain 26 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1986 Amo-Chr7 59331308 59333731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1986 7 197 NAC Transcription Factor Family AT5G39820 58.763 1.28e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo07g1986 NAM 2.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1986 - - adu:107459259 695.656