Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1985 ATGAAGGAGGGTGGTGGTCGGAAGCAAGGTGCAATGTCGCCGTGTGCGGCATGCAAGCTTCTCCGGCGGCGATGCGCAAAGGATTGCGTGTTTGCACCGTATTTCCCGGCTGATGAGCCCCAGAAATTTGGGAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAACTACCAGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTGTATGAGGCAAATGCAAGAGTAAGAGACCCTGTCTATGGATGTGTGGGTGCAATATCTTCTCTTCAGCAACAAGTTGATGTTCTCCGAACCCAATTGGCTCTTGCACAAGCCGAAGTTGTTCACATGAGAATGCGCCAATTCCCATCATCTAATCATCATGACCCTCCAATTTCATCTTCATCGAATCATTACCATCCAATTTCATCATCACCATCAGAGAATAACAATAATTTGAGCCAGACCAAGTCCCTTTTTTCCATGGACATGGTCCTTGATCATCAATCCAATATGGGACAGTCCCTTTGGTCATGCTAG 540 0.4667 MKEGGGRKQGAMSPCAACKLLRRRCAKDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLRTQLALAQAEVVHMRMRQFPSSNHHDPPISSSSNHYHPISSSPSENNNNLSQTKSLFSMDMVLDHQSNMGQSLWSC* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1985 179 Coils Coil 93 113 - -
Amo07g1985 179 MobiDBLite consensus disorder prediction 126 154 - -
Amo07g1985 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Amo07g1985 179 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Amo07g1985 179 MobiDBLite consensus disorder prediction 122 154 - -
Amo07g1985 179 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Amo07g1985 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1985 Amo-Chr7 59298468 59304608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1985 1 179 AS2 family AT1G31320 68.333 1.53e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo07g1985 LOB 1.1e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1985 - - mnt:21399316 269.24