Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1981 ATGGGGAGGAGACCTGCGAGGTGTTATCGACAAATTAAAAACAAGCCATACCCCAAGTCACGGTTTTGCCGTGGTGTTCCTGATCCCAAGATCAGAATTTATGATGTAGGTATGAAGAAGAAGGGTGTGGATGAGTTCCCCTTCTGTGTCCACCTTGTTAGTTGGGAGAAGGAAAATGTCTCAAGTGAGGCACTGGAAGCTGCTAGGATTGCCTGCAACAAGTATATGGCTAAGTTTGCTGGAAAGGATGCTTTCCATTTGAGAGTGAGGGTTCATCCATTCCATGTTCTTAGGATCAACAAGATGCTTTCTGTGCTGGAGCCGATAGGCTTCAAACTGGAATGA 345 0.458 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSVLEPIGFKLE* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1981 114 Gene3D Ribosomal protein L10e/L16 1 108 IPR036920 GO:0003735|GO:0005840|GO:0006412
Amo07g1981 114 CDD Ribosomal_L16_L10e 41 101 IPR016180 GO:0003735|GO:0005840|GO:0006412
Amo07g1981 114 PANTHER 60S RIBOSOMAL PROTEIN L10-LIKE 1 105 - -
Amo07g1981 114 Pfam Ribosomal protein L16p/L10e 12 100 IPR016180 GO:0003735|GO:0005840|GO:0006412
Amo07g1981 114 PANTHER 60S RIBOSOMAL PROTEIN L10 1 105 IPR001197 GO:0003735|GO:0005840|GO:0006412
Amo07g1981 114 SUPERFAMILY Ribosomal protein L16p/L10e 4 105 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1981 Amo-Chr7 59182004 59184677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1981 1 104 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 94.231 2.63e-71 210