Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1972 ATGGCAACACCGACAAGCAAAAATGTTTTCTCAGCACTTGACAAAGCTAAGACACAAAGATACCATTACAAAGCAATTGTAATTGCTGGAATGGGATTCTTTACTGATGCCTATGATCTCTTCTGCATCACGGCCGTGGCGAAGCTTATGGGCCGCCTTTACTACTATGATCCTACTAGTCATGACCCTGGAAAGCTACCAAAGAATGTGAACAACGCAATAACAGGCGTGGCGCTGTGCGGAACGCTTGCAGGACAACTCTTCTTTGGCTGGCTTGGAGACAAGCTTGGTAGGAAAAAGGTTTATGGAATAACTCTTGTTACCATGGTTGGTTGTGCTTTAGCATCAGGCCTTTCCTTTGGTTCCACATCAAAAAGTGTGGTGGGAAGTCTATGCTTCTTTAGATTCTGGCTAGGATTCGGCATTGGAGGAGACTACCCTCTTTCGGCCGTGATAATGTCCGAATATGCGAACAAGAAGACTCGAGGCGGCTTCATTGCAGCCGTCTTTGCAATGCAGGGAGTTGGAATACTGGTGGCTGGAGGCGTAGCCATGTTTGTCTCCCGTCTTTTCTTATCAGCATATCCGGCTCATGATTTCGCAGCCGATCCGGCTGCGTCTACTCAGCCTGAAGGAGACTTTCTGTGGCGAATTGTGCTAATGTTTGGTGCATTTCCAGCAGCATTAACATATTATTGGAGAATGAAAATGCCAGAAACTGCGCGATACACGGCCTTGGTGGAAGGAGATCACAAGAAAGCTGTCCAAGATATGGAGAAAGTTCTAGATAAGGACATACCTTCAGAAGAATCGAAATACCGGCTTGACGACGCTGCGCCTAGCACCTCTTATGGACTATTCTCATCAGAGTTTCTAAGCAGGCATGGTTTACACCTTCTTGGAACAACCAGCACATGGTTCTTGTTGGATATTGCATTCTATAGCCTTCAACTTGCACAGAAAGATATCTACCCTGTGATTGGACTAGTACACAAGGCTTCCAAAATGAATGCCATAAGAGAGGTTTATGAACTCTCTAGAGCAATGTCTGTCGTCGCCCTGCTCGCCACCGTGCCCGGATACTGGTGCACTGTATTCTTCATTGACAAGATTGGAAGGTACACAATCCAGCTTGTTGGCTTCCTTGCAATGTCTGTTTCTATGTGGTTTCTTGGACACAATTATGGAGAATACAGGGGACAATCTAACTGCAGCCCGGCCGTAACGACCGATTACTGTAACGGCAAGCCTCACATGTTTGCTCTACTTTATGGAGTTACCTTGTTCTTTGCTAACTTTGGACCCAATAGTACAACTTTTATAGTGCCGGCGGAGCTGTTCCCTGCTAGATTCCGATCGACCTGCCATGGTTTATCGGCCGCAGCTGGAAAATCTGGAGCTATAATTGGTGCTTTTATGGTCCAGGGTTATATTGATAATGCAGATAACAAAACAGAGAGAATGAAGAAAGCAATCCTGGGACTTTCAGTTGTCAATTTGATTGGATTCTTTTGCACTTTCTTGGTTCCGGAAACACGAGGTAGATCGCTTGAAGAAATTTCCGGTGAGGATAAAGAATTCCATAGTGTTATTGTAGATGATCCAGATATGAAAACAGATGATGAAACAAAGGAAGAAAGAAATGCCAGTGTTGATGATTCTTCAGGAACCCTAACAGTTTAA 1683 0.4486 MATPTSKNVFSALDKAKTQRYHYKAIVIAGMGFFTDAYDLFCITAVAKLMGRLYYYDPTSHDPGKLPKNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLVTMVGCALASGLSFGSTSKSVVGSLCFFRFWLGFGIGGDYPLSAVIMSEYANKKTRGGFIAAVFAMQGVGILVAGGVAMFVSRLFLSAYPAHDFAADPAASTQPEGDFLWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGDHKKAVQDMEKVLDKDIPSEESKYRLDDAAPSTSYGLFSSEFLSRHGLHLLGTTSTWFLLDIAFYSLQLAQKDIYPVIGLVHKASKMNAIREVYELSRAMSVVALLATVPGYWCTVFFIDKIGRYTIQLVGFLAMSVSMWFLGHNYGEYRGQSNCSPAVTTDYCNGKPHMFALLYGVTLFFANFGPNSTTFIVPAELFPARFRSTCHGLSAAAGKSGAIIGAFMVQGYIDNADNKTERMKKAILGLSVVNLIGFFCTFLVPETRGRSLEEISGEDKEFHSVIVDDPDMKTDDETKEERNASVDDSSGTLTV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1972 560 MobiDBLite consensus disorder prediction 531 551 - -
Amo07g1972 560 Gene3D MFS general substrate transporter like domains 21 535 IPR036259 -
Amo07g1972 560 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 8 533 - -
Amo07g1972 560 MobiDBLite consensus disorder prediction 531 560 - -
Amo07g1972 560 CDD MFS_PhT 26 512 - -
Amo07g1972 560 SUPERFAMILY MFS general substrate transporter 12 522 IPR036259 -
Amo07g1972 560 Pfam Sugar (and other) transporter 26 521 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo07g1972 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 514 IPR020846 GO:0022857
Amo07g1972 560 PANTHER PHOSPHATE TRANSPORTER 8 533 - -
Amo07g1972 560 TIGRFAM 2A0109: phosphate:H+ symporter 12 523 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1972 Amo-Chr7 58951012 58952730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1972 9 523 Inorganic Solute Cotransporters AT5G43360 61.217 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1972 K08176 - gmx:100820250 861.292