Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1940 ATGCCGAATCCCGAGGCTCACCGTCACAACCAAAACCGCTCCAGCAAGTCACGCCCCTCCACGTCATCGGAAAGGCCCGTGGCGCCGCGCCCGCCGGCTCGGCCGAGAGTCCGGCTCCGGCAGCTGCTGCGTGTAGCTTCTGTGGCCAGCGGAATCCAGTTCGGATGGGCGCTTCAGCTCTCTCTCCTCACTCCCTATGTTCAGCAGCTCGGGATCCCTCACCAGTGGGCCAGCATCATCTGGCTCTGCGGCCCCGTCTCCGGCCTCTTCGTTCAGCCACTCGTCGGACACCTCAGCGACCGCTGCACCAGCCGCTTTGGTCGCCGGCGTCCTTTCATCCTCGCCGGTGCCGCCGCGATCATCGTTGCTGTCATCATAATTGGATACGCTGCTGACATCGGCTGGCTCCTCGGCGACACCGATACTTTCCGGCCGGCGGCGATAACCGTCTTCGTGATCGGGTTCTGGATCCTCGACGTAGCGAATAACGTGACTCAGGGTCCTTGTAGAGCTCTCCTGGCTGATCTCACTACCAATGATCCTCGAAGAACGCGCGTTGCAAATGCTTATTTTTCTCTTTTTATGGCTGTTGGTAACATTCTTGGCTATGCAACTGGATCGTACAGTGGTTGGTACAAGATTTTTGCTTTCACACTTTCACCTGCATGCACTATTAGTTGTGCAAATCTCAAGTCCGCTTTCTTTCTTGATATTATTTTCATTGCGATCACCACATATCTCAGCCTCATGGCAGCTAAAGAAGTGCCTATAAGTTCAAGTGCGGCAGCCCATGCTGAGGGAGGAGCAGCGGGTTCAGGTAGTACAGAAGAGGCTTTCATGTGGGAGCTATTTGGGACATTCAAATATTTTACGACTCCTGTATGGATTATCCTGTCTGTTACTGCTCTAACATGGATCGGATGGTTCCCTTTTATTCTATTTGACACTGATTGGATGGGTCGAGAGATTTATGGTGGTGATCCAAATGGAGGCCCTAATTATGATGCTGGGGTCAGAATGGGAGCACTTGGATTAATGCTTAATTCAGTTGTTCTTGGAATAACATCATTACTCATGGAGAGGTTATGCAGGAAACGCGGTGCTGGGTTTGTTTGGGGTGTCTCAAATATTATAATGGCCATCTGCTTTCTTGCAATGCTTGTAGTAACATATGTTGCAAGCAACGCTAGCTATTTAGGCAAAGATGCACCACCAACTGGCATCGTGATAGCTGCAGTGATACTCTTCACCATTCTTGGGTTTCCATTATCAATCACTTACAGTGTTCCATATGCCTTAGTTTCCACACATATTGAGTCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGATCCCACAGATAGTGGTGTCATTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGAGGAAATGCCCCAGCCTTTGCCGTGGCAGCTCTTGCAGCCCTTGTCAGTGGACTCATAGCTATCCTGGCTATTCCCCGATCTGGTGGTCAAAAGCCCCGAACTCGTGTATGA 1539 0.5107 MPNPEAHRHNQNRSSKSRPSTSSERPVAPRPPARPRVRLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDRCTSRFGRRRPFILAGAAAIIVAVIIIGYAADIGWLLGDTDTFRPAAITVFVIGFWILDVANNVTQGPCRALLADLTTNDPRRTRVANAYFSLFMAVGNILGYATGSYSGWYKIFAFTLSPACTISCANLKSAFFLDIIFIAITTYLSLMAAKEVPISSSAAAHAEGGAAGSGSTEEAFMWELFGTFKYFTTPVWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGPNYDAGVRMGALGLMLNSVVLGITSLLMERLCRKRGAGFVWGVSNIIMAICFLAMLVVTYVASNASYLGKDAPPTGIVIAAVILFTILGFPLSITYSVPYALVSTHIESLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNAPAFAVAALAALVSGLIAILAIPRSGGQKPRTRV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1940 512 Pfam MFS/sugar transport protein 57 204 - -
Amo07g1940 512 PANTHER SUGAR TRANSPORTER 11 510 - -
Amo07g1940 512 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 11 510 - -
Amo07g1940 512 SUPERFAMILY MFS general substrate transporter 38 505 IPR036259 -
Amo07g1940 512 CDD MFS_SLC45_SUC 42 478 - -
Amo07g1940 512 MobiDBLite consensus disorder prediction 1 33 - -
Amo07g1940 512 TIGRFAM GPH_sucrose: sucrose/H+ symporter 38 503 IPR005989 GO:0005887|GO:0008515|GO:0015770
Amo07g1940 512 Gene3D MFS general substrate transporter like domains 36 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1940 Amo-Chr7 58136560 58144185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1940 7 508 Sucrose Transporter Gene Family AT1G09960 71.571 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1940 K15378 - gmx:100820483 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1118 17 30185001 30192462 Amo07g1940 07 58136560 58144185 hybridization