Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1914 TTGAAGCCCACCGTTCGACGTCGCCTTGCTCCAACCTGTGAAGCTAGGCATCAGTCGCGCTTTGGCCACCGTCCATCATTGCCATCTCTTGGGTTGTTTATGGAGCTTGTCTCGAAGTCTCAAACCCCTCGCCGTTTGTGTCATCGTTGTGAAAGCCTCAAAGCCCTCCCTAAATTCGCAAATCGCCAGATTCTACGGGCCTGGTGTTTTGTTGATGTAAAATTCACATCTGGACAAGCACTTGGTGGTCACATGAGGAGGCATAGGATAGCTGTCATCACTATTACTAGTCCTCAACCAACGCTGGAGGTTGTTAAGCTGCCGCAGAATCTTCTGGATTTGGATCTTAACCTTCCGGTACCGGCCAACGACGACCACCACCACCGGGATTCCCAGTTTCAGTTCTCGGCCACACAGAAAACCATGATGCTTTTTGCTGCACCACCTTTGGTGGATTGTCATTATTAA 468 0.5 LKPTVRRRLAPTCEARHQSRFGHRPSLPSLGLFMELVSKSQTPRRLCHRCESLKALPKFANRQILRAWCFVDVKFTSGQALGGHMRRHRIAVITITSPQPTLEVVKLPQNLLDLDLNLPVPANDDHHHRDSQFQFSATQKTMMLFAAPPLVDCHY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1914 155 PANTHER ZINC FINGER PROTEIN ZAT5 73 155 - -
Amo07g1914 155 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 73 155 - -
Amo07g1914 155 Pfam C2H2-type zinc finger 75 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1914 Amo-Chr7 56978187 56981180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1914 74 155 C2H2 Transcription Factor Family AT2G28200 42.857 7.72e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1914 - - rcu:8275248 84.3445