Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1896 ATGATTGCATTTAAACAATACAAGATGTGTGGCGATCAATCTGATGAAGTTGGGAATTGTTTACCTGCCTCTTCATCATGCGATGATCTTCAAAGTATACTTGTGAGACACAACAGGTCACTTCTGCTGCTAAGTTGCGATTTTATGACAGCATGGAATTGCAGAAAGTTAGTAGTTTCCAAGGAGAAGCAGCACTCCATGTTGTTGGATGAACTTCATCTGTTTGTGTTCGTACTTTCATATTCACCTAAAAGTGAACAAGCTTGGAATCATAGTCTGAGAACAGCATCGATAAATAAGAAATATACTTTGCAGATTAGACTTTCTTTCTTTCTTTCTGAACCTGGGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGTAGGATGAACCCTAAGGATTGGTTTGAAGACCCTTTTGCATTGGGAGTTCTTATGGAAAGGTGCCAGCGTGTTCTTCTTTCGGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTAGTTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAATTGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGTTTAGACTATTTGAACCGATTGTTTTTTGTCTCGCTAGCATTAGTATTGGAGAATTTATGGTGGTGGTGATCTTGCGGGAACAAGCGAATGAGTGCTACAAACACATAGTGAAACAATTGGTTTTGAATCATGAAGGCATTTACAATCTTTGCCAAAAACGCAAACGAATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTAA 882 0.3934 MIAFKQYKMCGDQSDEVGNCLPASSSCDDLQSILVRHNRSLLLLSCDFMTAWNCRKLVVSKEKQHSMLLDELHLFVFVLSYSPKSEQAWNHSLRTASINKKYTLQIRLSFFLSEPGTVQRMELLVLSTLQCRMNPKDWFEDPFALGVLMERCQRVLLSVIPNSRFMGYLPSTLVAATMIHVIKEIELLNAMEYINQLMGLLKTSEFRLFEPIVFCLASISIGEFMVVVILREQANECYKHIVKQLVLNHEGIYNLCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1896 293 PANTHER CYCLIN-D3-2 114 286 - -
Amo07g1896 293 Gene3D Protein prenylyltransferase 12 120 - -
Amo07g1896 293 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Amo07g1896 293 Pfam Cyclin, C-terminal domain 150 209 IPR004367 -
Amo07g1896 293 SUPERFAMILY Protein prenylyltransferase 40 93 - -
Amo07g1896 293 PANTHER CYCLINS 114 286 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1896 Amo-Chr7 56534046 56535907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1896 104 286 Core Cell Cycle Gene Families AT5G67260 33.166 9.34e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1896 K14505 - ahf:112703307 297.36