Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1867 ATGGCAAAACCTATACCCAAAATTGGTTCGCGTAAAAATGGACGTATTGGTTCACGTAAACATGCTCGTAAAATACCAAAGGGCGTTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTCACTGTTACCGATGTACGGGGTCGGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTATGCGAAGGGGAACACCATTTGCCGCCCAAACCGCAGCAGGAAATGTTATTCGAACAGTAGCGAATCAAGGCATGCAACGAGCAGAAGTCATGATAAAGGGTCCCGGTTTCGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGGCATACTCTTAAATTTTATACGGGATGTAACCCCTATGCCACATAATGGGTGTAGGTCCCCTAAAAAATGA 408 0.4461 MAKPIPKIGSRKNGRIGSRKHARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGMRRGTPFAAQTAAGNVIRTVANQGMQRAEVMIKGPGFGRDAALRAIRRSGILLNFIRDVTPMPHNGCRSPKK* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1867 135 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 7 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 Hamap 30S ribosomal protein S11 [rpsK]. 11 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 SUPERFAMILY Translational machinery components 23 135 - -
Amo07g1867 135 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 TIGRFAM uS11_bact: ribosomal protein uS11 19 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 Pfam Ribosomal protein S11 28 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 ProSitePatterns Ribosomal protein S11 signature. 106 128 IPR018102 -
Amo07g1867 135 Gene3D Ribosomal protein S11 9 135 IPR036967 GO:0003735|GO:0005840|GO:0006412
Amo07g1867 135 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 1 135 - -
Amo07g1867 135 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1867 Amo-Chr7 55851953 55852360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1867 28 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 38.182 1.39e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1867 K02948 - gmx:3989330 253.832