Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1862 ATGCCTCATAGAGCAACTTACATTTTCCCTAGGCAATTTCCAGAGAGAGGGTTGGATGAATCTGCGAGGCAGAGATTGGATCACGAGAAGAAGAGACTCGTCAACTCTGTCAAATCACCTGATAATGATAATAATTTTGGCACTGAAAACGACGTCGCGTCTTCAACGACTACTACTACTGCTACTGACACACCTGTTACTACTGCTCCTCACTCCAAAGACGTCGTCGTTTTTCCCTCGGGGAAACACTCGGCTGTTTCTGACCTCTTCGCCGGCGCCGGCGTTGCCGGAGTAGGCAGGTTCAGGGCAAAGAGCAAGCAAATCGCCGCCTTCTGTAACTGGATCAACGATAAGAAGCGTGATTCTGGTAACCGATTGGATTGTCGCCGCCATGCTTTGGCGGCAGCGGAGGAGGAGGAGGATGATGACGATCACGAAATGTTGGTTCCTCCCACGGCGGCGGCGGGGACGGTCAAAGATTCCAGCGGCGGCGGAGGCGTTGACCAGAGCTTCGATCGGCAGGTGTCGCTGCCGCGGTTGTCGAGTGGAAGCAGCTACGCCGGGAGCTTGTTCTCCGGAACGACGACGTTCGACGGCACCGCCACATTTTCCAGCGACATTAACACCATTAACATCAAAGACGACTCCTCGTCCCCCAACGCAACAAGGAAGCACCACCACGACGAAGAAGAGGAGCAAGATCGCAACAACAATAACATCGATAACAGTTATGCTAGAAAGTACAAAGAAAGCTACTACCTCCAAGTCACATTAGCGAAGAGGCTCGCTTGCTTAGCAAGCCTCAGCACGGAACCCTTTCTCATCACCGCAACCGAGACTTGGGATGCTGAATCCGTTTCTTATCGCTTATGGGTGAATGGGTGCTTGTCGTACACGGATAAGATATCGGATGGTTTTTACAACATACTGGGTATGAATCCATACCTGTGGGTGATGTGCAACGAGAACGAAGAAGGGAAGAAGCTGCCTACGCTGATGGCGCTGAAAGCAGTTGAGCCGAGCGAATCGTCGATGGAGGTTGTCGTTATTGATAGGCACGAGGACTGTCGGCTTAAGCAGCTTATGGATAAAGCGGAGGAGCTGTATTGTGAATCGGAGAACTCGTTGGCGCTGGTTGAGCAACTTGGGAAGCTAGTTGCCATATGCATGGGGGGCACCTTTCCGGTTGAGCAAGGGGATCTGCACAACCGGTGGAAGATGGTAAGCAAGAGGTTGATAAGTTTTTACCAATGCGTTGTGCTTCCCATTGGAAGCTTGTCTGCTGGTCTGTGTAGGCATCGCGCCATTCTCTTTAAGAGATTGGCAGATTATGTAGGTTTGCCATGTCGCATTGCTAAAGGTTGCAGGTACTGTGCTTCAGATCATAGATCCTCTTGTCTTGTCAAGATTAAAGACGACAGGCAGCACTTAAGGGAATATGTTGTGGACCTAGTCGGAGAACCAGGAACCATCCACGGGCCAGATTCCTCGATCAATGGAGCATATTTGTCTTCCGTTCCTTCTCCATTTCGGATTTCTCATTTAAAGGAATGCCAGTCGCCATATCTGGCTGGTGAAGCATGTAACCGTTCAGTAAATTCAAATCTTACAGGTTGTGTACAGGAAGGTCCTGAAGGAAAAGATACTAATTTGCTGAAAAATTATAAGAACTCCAGTTTTGCCTCAGTTGATCAAAATTCTGGAGGTGTTTCTGAAGCTGTTCGTCCAGCCTCTGTAACATACGATGAATATCCTGGAATTGCTAAAGATGAGGTTGTGGCACAAGACATTTCCAACAATGAGATCATTACGAAGAAAAATTCTGAAGCAAAAACCATTTCTAACCAATCTATACAGAGCACAACCAACCAGTCAGCACAAGAGAAGATAGGCAATAAACATGAAAACCACGGTTCTGGAAATATTCCAAGATACGTGAATCTTGAACCATCGCTTGCAATGGACTGGCTAGAGATAGCATGGGAAGATTTACGTATCAAAGAGCGTATTGGTGCTGGATCATTTGGGACAGTGTACCGAGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTTTTAAGAGAGGTTGCAATAATGAAACGTGTTCGGCATCCAAATGTGGTGCTCTTCATGGGTGCGGTTACAAAACGTCCCCATCTATCTATTGTCACAGAGTATTTGCCTCGGGGGAGTCTATACCGCCTGATACATAGGCCAGCATCTGGTGAAATTCTTGATCCGAGGAGACGACTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTCCATTGTCTAAAGCCTCCAATAGTGCACTGGGATCTGAAATCTCCAAACCTGTTGGTGGACAGAAATTGGACAGTAAAGGTGTGTGATTTTGGATTATCCAGATTTAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCTGAATGGATGGCCCCAGAATTTCTTCGCGGAGAACCTTCGAATGAGAAGTCTGATGTCTACAGTTTCGGCGTCATCATGTGGGAACTCATAACCCTGCAACAACCATGGAGTGGACTTGGCCCTGCCCAGGTCGTTGGAGCTGTGGCTTTCCAGAATAGAAAGCTAGCTCTCCCTCCAAACATCTCCCCAGTATTGGCATCTGTTGTGGAATCATGTTGGGCCGATAACCCTGCTGATCGCCCATCTCTTCCTAGCATAGTTGAGTCGCTGAAGAAGCTGCTAAAGTCCCCAGTGAATTCCATAAAAATGGGTGATGAGACATAA 2808 0.4761 MPHRATYIFPRQFPERGLDESARQRLDHEKKRLVNSVKSPDNDNNFGTENDVASSTTTTTATDTPVTTAPHSKDVVVFPSGKHSAVSDLFAGAGVAGVGRFRAKSKQIAAFCNWINDKKRDSGNRLDCRRHALAAAEEEEDDDDHEMLVPPTAAAGTVKDSSGGGGVDQSFDRQVSLPRLSSGSSYAGSLFSGTTTFDGTATFSSDINTINIKDDSSSPNATRKHHHDEEEEQDRNNNNIDNSYARKYKESYYLQVTLAKRLACLASLSTEPFLITATETWDAESVSYRLWVNGCLSYTDKISDGFYNILGMNPYLWVMCNENEEGKKLPTLMALKAVEPSESSMEVVVIDRHEDCRLKQLMDKAEELYCESENSLALVEQLGKLVAICMGGTFPVEQGDLHNRWKMVSKRLISFYQCVVLPIGSLSAGLCRHRAILFKRLADYVGLPCRIAKGCRYCASDHRSSCLVKIKDDRQHLREYVVDLVGEPGTIHGPDSSINGAYLSSVPSPFRISHLKECQSPYLAGEACNRSVNSNLTGCVQEGPEGKDTNLLKNYKNSSFASVDQNSGGVSEAVRPASVTYDEYPGIAKDEVVAQDISNNEIITKKNSEAKTISNQSIQSTTNQSAQEKIGNKHENHGSGNIPRYVNLEPSLAMDWLEIAWEDLRIKERIGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDRNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVIMWELITLQQPWSGLGPAQVVGAVAFQNRKLALPPNISPVLASVVESCWADNPADRPSLPSIVESLKKLLKSPVNSIKMGDET* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1862 935 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 167 933 - -
Amo07g1862 935 MobiDBLite consensus disorder prediction 218 237 - -
Amo07g1862 935 MobiDBLite consensus disorder prediction 614 629 - -
Amo07g1862 935 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
Amo07g1862 935 MobiDBLite consensus disorder prediction 34 67 - -
Amo07g1862 935 PRINTS Tyrosine kinase catalytic domain signature 738 751 IPR001245 GO:0004672|GO:0006468
Amo07g1862 935 PRINTS Tyrosine kinase catalytic domain signature 779 797 IPR001245 GO:0004672|GO:0006468
Amo07g1862 935 PRINTS Tyrosine kinase catalytic domain signature 889 911 IPR001245 GO:0004672|GO:0006468
Amo07g1862 935 PRINTS Tyrosine kinase catalytic domain signature 845 867 IPR001245 GO:0004672|GO:0006468
Amo07g1862 935 MobiDBLite consensus disorder prediction 614 642 - -
Amo07g1862 935 MobiDBLite consensus disorder prediction 1 20 - -
Amo07g1862 935 Pfam Ethylene-responsive protein kinase Le-CTR1 283 491 - -
Amo07g1862 935 Gene3D Transferase(Phosphotransferase) domain 1 743 931 - -
Amo07g1862 935 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 167 933 - -
Amo07g1862 935 ProSitePatterns Protein kinases ATP-binding region signature. 670 691 IPR017441 GO:0005524
Amo07g1862 935 CDD STKc_MAP3K-like 670 918 - -
Amo07g1862 935 MobiDBLite consensus disorder prediction 209 241 - -
Amo07g1862 935 SUPERFAMILY Protein kinase-like (PK-like) 640 917 IPR011009 -
Amo07g1862 935 SMART serkin_6 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1862 935 ProSiteProfiles Protein kinase domain profile. 664 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1862 935 Pfam Protein tyrosine and serine/threonine kinase 664 918 IPR001245 GO:0004672|GO:0006468
Amo07g1862 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Amo07g1862 935 MobiDBLite consensus disorder prediction 38 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1862 Amo-Chr7 55686518 55693257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1862 1 932 MAP Kinase Kinase Kinase AT4G24480 54.029 0.0 1005
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo07g1862 PK_Tyr_Ser-Thr 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1862 - - aip:107609156 1815.43