Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1856 ATGAAACAACCTCCACATTCTGGTTTCTGGACAAACATGACCGAACACAACAACACTTATAATTTTACGGGTTTTCTTCTTGACCCTGCAAAGTGCAGCACGCTGAATCTGCAAGAGAAACAAAAGCTAGTCCATGAGATTGCTCGCCAGTCAAAAGATGCTCCGAGTATGCTTCGATCCCTAACACGCAGGGAACTTCTGGAAATAATTTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAAAATCAAATGATTGAGCATCTTCTTAAGATTATTTCGAAGAATTCCAAGTTGCATGTAATCCAAAATACTCCTGCCCATTCTCCGTCGAAAAGGAAAAAAGGACCTGCATCTCAAGATTTGGATCATGATTCTCCTGAGGATAGTAAAGACGAAATAGTGAAAGTCTTATTGTGTCAAAATGTTGCTTGTAAAGCTACTTTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGCTGCATTTGTCATTGCTATGACGATAACAAGGACCCCAGTTTGTGGTTGACTTGCACCAATGAGGAATCATGTGGAATGTCATGCCATTTACGATGTGCTTTGAGTAATCAATTGTCTGGAATTTTGAAGAGCAGTTTTGGTGTAAAGTTAGAAGGAGCCTTCTTTTGTGTTTCCTGCGGAAAAATTAATGAATTAATGAGCACATGGCGTAAACAGTTATTGGTTGCCAAAGAAGCTAGAAGAGTAGATATACTCACTTTGCGAATAACATTGGCTCACAGAATTCTTATTGGAACAGAAATATACAGTGAAATACAGAAGATTGTTGAAACTGCTCTCAAGTTATTGGATAATGAAGTGGGACCTCTGGATAATGTATGTGCAAGCATGACCCGCGGTATTGTGAGCAGACTCTATTGTGGTGCTGAGGTTCAGAAGTTGTGCTCCAATGCAATTGAATGTTTTGATTTGAAGTTTTCTAATCTCTTCCATAGTCATGTGGAGAAGAAAGACACACCAACATGCTCCATACGTTTTGAAGAGTGTCTTCCTACATCCGTGGTTCTTGTTCTTGAATATGATGATAAACTTCTGAAGAACTTTCTAGGTTGCAGGCTTTGGCACCGAATGTCAACAACGGTGTACCCTGAACAACCCACCTTTATTGTTTTAAGGCCTGAGAAAAGATTCAAATTAGAAAATCTCCTTCCTTCAACTGAGTACTTCTGCAAGGCTTCTCTATTCAGCAGCATTGGGATTTTGGGTGCTGCTGAAGCTAAATGGGTAACACCTTGTGAGTCCGTGAATCCTCTTCCAAATGTTATTAGGTGTGGTGGTAACCATTTATCACAGTCACCTCAGAGATCCCCAGTGATAGGTATGCACAAATTTTCACAGAGAATGATCAAGACAAATGCTGAAAATCATCCAGTAGAATCTGCCAACTCTCACATCAGGGGCAGCTTTGAGGAGTTCCTAACTCGGACTCCCTCAGTCGTACCATTTTCACATAAAACTTCAGTTGCGGTTTCACCTCCAACGCCTTCTAAACCCAATGAAATGAGGCAACTCAGTGCTTTGTTGCCGAGGAACCGTTTGAAGGAACATGATTATGAGCATTCCGTCAGGGTAGTCAAATGGTTAGAACACCAAGGGCACATTGACGAACTCTTCAGAATAAGGTTTCTCACATGGTTCAGCCTCAAGGCTACGCAGCAGGAGAGAAGAGTGGTCAGTGCTTTTGTCGATGCACTGATCGACGAGCCTTCAAGCTTAGCAGACCAGCTCGTACACACTTTCTCGGACGTGATATGTTCCGAGCAGAAACCTTAG 1824 0.4161 MKQPPHSGFWTNMTEHNNTYNFTGFLLDPAKCSTLNLQEKQKLVHEIARQSKDAPSMLRSLTRRELLEIICAELGKERKYTGYTKNQMIEHLLKIISKNSKLHVIQNTPAHSPSKRKKGPASQDLDHDSPEDSKDEIVKVLLCQNVACKATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCTNEESCGMSCHLRCALSNQLSGILKSSFGVKLEGAFFCVSCGKINELMSTWRKQLLVAKEARRVDILTLRITLAHRILIGTEIYSEIQKIVETALKLLDNEVGPLDNVCASMTRGIVSRLYCGAEVQKLCSNAIECFDLKFSNLFHSHVEKKDTPTCSIRFEECLPTSVVLVLEYDDKLLKNFLGCRLWHRMSTTVYPEQPTFIVLRPEKRFKLENLLPSTEYFCKASLFSSIGILGAAEAKWVTPCESVNPLPNVIRCGGNHLSQSPQRSPVIGMHKFSQRMIKTNAENHPVESANSHIRGSFEEFLTRTPSVVPFSHKTSVAVSPPTPSKPNEMRQLSALLPRNRLKEHDYEHSVRVVKWLEHQGHIDELFRIRFLTWFSLKATQQERRVVSAFVDALIDEPSSLADQLVHTFSDVICSEQKP* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1856 607 MobiDBLite consensus disorder prediction 117 131 - -
Amo07g1856 607 PANTHER OS08G0220600 PROTEIN 18 607 - -
Amo07g1856 607 MobiDBLite consensus disorder prediction 108 131 - -
Amo07g1856 607 Pfam PHD - plant homeodomain finger protein 143 258 IPR032881 -
Amo07g1856 607 PANTHER VIN3-LIKE PROTEIN 2-RELATED 18 607 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1856 Amo-Chr7 55579632 55584505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1856 528 605 PHD Gene Family AT5G57380 48.718 6.70e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1856 - - gmx:100785502 875.544