Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1843 ATGCAAACGGCAACGAGAGCAGAAGCCGAACGTCTACTCGGGATCGCAGAAAAGCTCCTGCACACCCGCGATCTCAACGGCTCCCGCGAATTCGCCATCCTCGCCCAAGAAACCGAACCTCTTCTAGAAGGTTCCGACCAGATCCTCGCCATCGTCGAMGTCCTCTTAGCCGCTGATAACCGTCCAAACGCCGCCACCAGCCACCCCCACCACCACCAACTCGATTGGTACGGCATCCTCCAGGTGGACCGCCGCACCAACGACCTCGACCTCATCAAGCGCAACTACCGCCGCCTCGCTCTCCTCCTCCACCCTGACAAGAGCCGCTTTGCGTACGCCGACCACGCCTTTAAGCTCGTYGCCGACGCCTGGGCGGTGCTCTCGGACCCAATCAAGAAGTCCAACTACGACAAGGAGCTCTCYTTCTTCTCCCGAGTCGACCTCTCCGTTCCCGGCTGGGTCCAGCAAGACAAGCTCCCGGTCCGTAGAACGGGACCTGGGCCTGGTCCAGGGCCAGGCCCAAGCGCCAGGACAAATAATAGCAGTAACACCATAAGCTTCGACGGGATGAATATCAGCATGACTAATAACACGCCTGCGTCCGCCGCGAGGAACGAGATTGCGGCGGACGAGAATTCGAACGCGAGGCAGCGGCAGGGGCAGAACAGATCGGGAAATTTCTGGACCGCGTGTCCGTACTGCTATAGGTTGTATGAGTACCCTAGGGTTTACGAGGGATGCTGCTTGAGGTGCCAGAATTGTGACAGGTCCTTCCATGGGATCTCGATTCCTTCGCTGCCCCCACTGGTGCCGGGGCAGGATGCCTATTATTGCTGCTGGGGGTTCTTTCCGATGGGGTTTGTGGTTGGGAATGTGGGATCTGCGGAGAAAGAGCCTGCGCCGGCGCCGGTTCCAGTCACGGTTGCACCTCCACAGTCTGCGTCCTCACTTCCGAATTGGATGCCTGCCGCGGCTGTTCAGGAGAATGGGGGAAATGTTGCTGTGTCGGTTGCAGCGCCTACGCCTGCGAGGGTAGCTGCCAGAGGAAGTATTTCGAATGGAGTTGCTGGATCTGGGCCGAGGAAGCGAGGGAGGCCTCGGAAGTATCCCTTGCAGTCATGA 1122 0.5909 MQTATRAEAERLLGIAEKLLHTRDLNGSREFAILAQETEPLLEGSDQILAIVXVLLAADNRPNAATSHPHHHQLDWYGILQVDRRTNDLDLIKRNYRRLALLLHPDKSRFAYADHAFKLVADAWAVLSDPIKKSNYDKELSFFSRVDLSVPGWVQQDKLPVRRTGPGPGPGPGPSARTNNSSNTISFDGMNISMTNNTPASAARNEIAADENSNARQRQGQNRSGNFWTACPYCYRLYEYPRVYEGCCLRCQNCDRSFHGISIPSLPPLVPGQDAYYCCWGFFPMGFVVGNVGSAEKEPAPAPVPVTVAPPQSASSLPNWMPAAAVQENGGNVAVSVAAPTPARVAARGSISNGVAGSGPRKRGRPRKYPLQS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1843 373 MobiDBLite consensus disorder prediction 348 373 - -
Amo07g1843 373 MobiDBLite consensus disorder prediction 174 221 - -
Amo07g1843 373 Pfam DnaJ domain 75 137 IPR001623 -
Amo07g1843 373 SMART dnaj_3 74 132 IPR001623 -
Amo07g1843 373 MobiDBLite consensus disorder prediction 157 221 - -
Amo07g1843 373 SUPERFAMILY Chaperone J-domain 67 140 IPR036869 -
Amo07g1843 373 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 336 - -
Amo07g1843 373 CDD DnaJ 75 129 IPR001623 -
Amo07g1843 373 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Amo07g1843 373 Gene3D DnaJ domain 62 147 IPR036869 -
Amo07g1843 373 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
Amo07g1843 373 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 336 - -
Amo07g1843 373 PRINTS DnaJ domain signature 112 132 IPR001623 -
Amo07g1843 373 PRINTS DnaJ domain signature 96 111 IPR001623 -
Amo07g1843 373 PRINTS DnaJ domain signature 77 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1843 Amo-Chr7 55217481 55219354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1843 223 371 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.584 2.56e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1843 - - adu:107459359 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1231 17 36102530 36103981 Amo07g1843 07 55217481 55219354 hybridization