Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1831 ATGAAGCTTGTAATGACATTTTTGGTTTCTTACTACTTTGTTCATCGTCAGGGCCTAGAGAGAAGCTCAATTGGAGTCTCAGATTTAGGATTATTTTGGGAACTGCCGAGTGACTTTGCTATCTTCATGAAGGGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGCTTCTAATATTCTTTTCTCTGAGAATTTTGAGCCTCAGATATCTGATTTTGGCCTAGCAAAGTGGTTATCTGACCAATGGACTCACCATACTGTTTGCAAAGTAGAAGGCACATTCAGGTACCTTCCCCATAAATTCTTCATGCATGGAATAGTAGATGAGAAAACTAATGTATATGCTTATGGTGTGCTATTATTGGAGCTAATCACTGGAAGACAAGCTTTGGATAGCTCACAAAAAAGTCTTATCATGTGGGCAATGATAAATGATATATTGGCTCACCGCAAGCCTGCAAGGGTTTTTGGAAGTGTTTTCTATTGCATGTTACTGGCAGGTTATGCTACCTTGGCCATAGGAACTGAGTGGATTTTTTGCCCCAAGCAAGAACTGATCTCTCTGGTGCTTTGTAGTTGCGATGTTCTTCTTTTGCTGTTAACAGGTTTTTTCCTTGCAATGCTCTTGTTTCATTCTCGAAATGAAATTTTTCTGTTGGGGAAAAAATGTAGCAAAATCTCAAAATTCTTTTACATAAGAATAAATTTTTAA 714 0.3782 MKLVMTFLVSYYFVHRQGLERSSIGVSDLGLFWELPSDFAIFMKGCQRRIIHKDIKASNILFSENFEPQISDFGLAKWLSDQWTHHTVCKVEGTFRYLPHKFFMHGIVDEKTNVYAYGVLLLELITGRQALDSSQKSLIMWAMINDILAHRKPARVFGSVFYCMLLAGYATLAIGTEWIFCPKQELISLVLCSCDVLLLLLTGFFLAMLLFHSRNEIFLLGKKCSKISKFFYIRINF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1831 237 ProSiteProfiles Protein kinase domain profile. 1 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1831 237 Pfam Protein kinase domain 48 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1831 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Amo07g1831 237 SUPERFAMILY Protein kinase-like (PK-like) 48 156 IPR011009 -
Amo07g1831 237 Gene3D Transferase(Phosphotransferase) domain 1 37 166 - -
Amo07g1831 237 PANTHER OS08G0249100 PROTEIN 42 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1831 Amo-Chr7 54641179 54642593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1831 39 142 Trihelix Transcription Factor Family AT1G68690 47.222 6.15e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo07g1831 Pkinase 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1831 - - aip:110271812 355.525