Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1824 ATGGCATCGAGTAGTTTGCGGAGTGTCTCAAGCCTTCTATGTGCAGAGGACAACATCAGCGTCTTCGACGAAAATGATTACGGCGGTGGTTCGGTGTTGTTGGCGGACACGTGGCATCATCTTAGGCATCAAAACCGTGAGGAGTTACTGTGGCAAGTGCCACAAGCAGTTAGCGAAGAGTATTTGGTGTTAATGGTGGAGAAAGAGTGTGACCACTTGCCTTGTCATGATTATCGTCATAGGCTCACAAATGGGGATTTGGATTTTGGGGCCAGAAATCATGCCATTCATTGGATTCAAAAGGTTCGAGAGCAATTTGGCTTTGGAGCCCTCTCTGCTTATCTTTCAGTAAATTACTTGGACCGTTTTCTTTCTTCGTATGAACTACCAAAGCAAAGGGTTTGGACAATGCAATTGTTGGCTGTGGCTTGCTTATCTCTTGCAACCAAAATAAATGAGACTGATCCTCCTCTTTGCCTTGATTTGCAGGTTGGTGAATTAAAATTTGTATTTGAAGCAAAAACAATCCAAAGAATGGAGCTTTTGGTACTTAGCACATTGAGATGGAGAATGCAATCAATTACCCCTTTCTCCTTCATTGACTATTTCCTTTACAAGGTCAATGATGATCAAAATCCAACAAGAGATTCAATTATGAGATCCATCCAACTTATACTGAGTACTGTAAAAGGAGAGAGTGTTGAAATGTGTGAAATTAATCCAAGGGTTGTCATCAAAGGATGGTTTTACTAA 753 0.413 MASSSLRSVSSLLCAEDNISVFDENDYGGGSVLLADTWHHLRHQNREELLWQVPQAVSEEYLVLMVEKECDHLPCHDYRHRLTNGDLDFGARNHAIHWIQKVREQFGFGALSAYLSVNYLDRFLSSYELPKQRVWTMQLLAVACLSLATKINETDPPLCLDLQVGELKFVFEAKTIQRMELLVLSTLRWRMQSITPFSFIDYFLYKVNDDQNPTRDSIMRSIQLILSTVKGESVEMCEINPRVVIKGWFY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1824 250 Pfam Cyclin, N-terminal domain 64 191 IPR006671 -
Amo07g1824 250 CDD CYCLIN 92 184 IPR013763 -
Amo07g1824 250 PANTHER CYCLINS 41 231 IPR039361 -
Amo07g1824 250 Gene3D - 65 228 - -
Amo07g1824 250 SUPERFAMILY Cyclin-like 55 191 IPR036915 -
Amo07g1824 250 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Amo07g1824 250 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 41 231 - -
Amo07g1824 250 SMART cyclin_7 97 185 IPR013763 -
Amo07g1824 250 Gene3D - 75 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1824 Amo-Chr7 54424504 54428714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1824 58 232 Core Cell Cycle Gene Families AT5G10440 55.682 2.90e-62 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1824 K18810 - gmx:100812660 302.753