Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1820 ATGTCTGAAACCCTTCTAGGTGATTGTTCTGGTGTGATGGGAGAAGACTGCGGAACATGGATGCCGCAGCTGCATTTCGATTGGCAGTCACCCAATTTGAATTCTTATGCGGGGAAGCAAAATGGCATATCTGCTGCTGTGAACTCAGGCATCAATAACATGGCCACGAGGAATGAGACAATGCCAACATATGCATCCTCTGCACTACCGCATTTGCAGTTAGGACATTCTAATGCACCACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTCCGACAGGGTTTTACACCTAACCCTGTCCCAAACTTAAATGCCGAAGAAAAACTCCATTCGGGCTGTGTCAAAACTTTCAGGGAGGAAACTAAACCTGACGGTGAATCTGGTTTCCATCAGAAGCAATTCCTGGTCATCGACCAATCAGGTGACAAAACAACCCTTATTTATAGCTCACGGCTTGGGAGTCCCGTCGAGTGCCTTGCTTCTTGGAATTCAAAACTGCATGGTTCTAATAACTTGAACAATGTGAATGAGCCGCCTTTTGGAAGAGATTTGAACCATGTGGTTGGACCAACTTTAGACGGTAAAGTTGATGATGAAAATCGGGGAATGGACACTGAAAGTGAGATGCATGAAGATACAGAAGAAATCAATGCACTACTTTACTCTGATAGCGAAGGTTACTCCACTGAGGATGATGAAGTTACTAGCACTGGCCATTCACCGAGTACAATGACCAGTCATCATAACCAGGAACCAATTAGGGAAACTGCAGAAGAAGTTGCTAGTTCTGCTGGAAAAACAAAGAAGCGGAAGCTGTACGAAGAAAATCATGCGGATGAGCAAGTTATGGATACAGCAAGTTCTCTGAATGTGAACAGACCCTTAAACTTGGGAGACGATGCAGAATCAAGATGCTCCTGTGGCAGCAACAGTCAAGGGTTAAATGACGAAATAAGGTCCTTGTTAGGCAACAAGAAGATGAGGAAGGAGAAGATACAAGAGGTTCTGAGCATTCTGCAGTGCATAATTCCCAGTGGGAAGGACAAGGAACTTGTCGAGCTTCTTGACGAAGCCATAGGATCCTTGAAATCCTTGAAGATGAAGGCCAGAGCTCTCGGACTCGATGCCTAA 1131 0.45 MSETLLGDCSGVMGEDCGTWMPQLHFDWQSPNLNSYAGKQNGISAAVNSGINNMATRNETMPTYASSALPHLQLGHSNAPPHGWFYCLPRFRQGFTPNPVPNLNAEEKLHSGCVKTFREETKPDGESGFHQKQFLVIDQSGDKTTLIYSSRLGSPVECLASWNSKLHGSNNLNNVNEPPFGRDLNHVVGPTLDGKVDDENRGMDTESEMHEDTEEINALLYSDSEGYSTEDDEVTSTGHSPSTMTSHHNQEPIRETAEEVASSAGKTKKRKLYEENHADEQVMDTASSLNVNRPLNLGDDAESRCSCGSNSQGLNDEIRSLLGNKKMRKEKIQEVLSILQCIIPSGKDKELVELLDEAIGSLKSLKMKARALGLDA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1820 376 MobiDBLite consensus disorder prediction 227 283 - -
Amo07g1820 376 PANTHER TRANSCRIPTION FACTOR BHLH145 13 375 - -
Amo07g1820 376 MobiDBLite consensus disorder prediction 231 250 - -
Amo07g1820 376 MobiDBLite consensus disorder prediction 251 281 - -
Amo07g1820 376 PANTHER TRANSCRIPTION FACTOR BHLH145 13 375 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1820 Amo-Chr7 54292761 54294009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1820 13 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.411 8.31e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1820 - - gmx:100812109 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3058 17 134378263 134379363 Amo07g1820 07 54292761 54294009 hybridization
Amo07g1820 07 54292761 54294009 Amo17g3058 17 134378263 134379363 PCT
Amo17g3058 17 134378263 134379363 Amo07g1820 07 54292761 54294009 PCT