Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1744 ATGGATGATCCAAATATCATTTGTCTGAAGCATCATTTCTTTTCCACTATAAGTACTGAAGGAAATAATTCATTCTTTTTCACTTTTCATACATATTTGGCACACATCCAGATTTTTATGGGGCTAGCTTATATCCACACTATTCTTGGAGTATGGCACAGAAATTTGAAGCCACAAAATATACTGATTGGCTTAATATCCTTTCTAAATGGACTTTATAACTCTAATGTCATTCTTGTATTTTCCCTGGTTGACCTTATTACAAACAGGTTAAGATATTTCTATCGCACACCAGAATTCATATTTAGTGCTACTGAGTATGCTACTTCAACTGATATTTGGTCGACTGGTTGTGTCCTTACTGAACTACTTTTGGGCCTGATTTATATCTGTTTTTTTTTTTAG 405 0.3333 MDDPNIICLKHHFFSTISTEGNNSFFFTFHTYLAHIQIFMGLAYIHTILGVWHRNLKPQNILIGLISFLNGLYNSNVILVFSLVDLITNRLRYFYRTPEFIFSATEYATSTDIWSTGCVLTELLLGLIYICFFF* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1744 134 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 127 - -
Amo07g1744 134 Gene3D Transferase(Phosphotransferase) domain 1 94 126 - -
Amo07g1744 134 Gene3D Transferase(Phosphotransferase) domain 1 9 69 - -
Amo07g1744 134 SUPERFAMILY Protein kinase-like (PK-like) 2 128 IPR011009 -
Amo07g1744 134 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 33 127 - -
Amo07g1744 134 Pfam Protein kinase domain 30 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1744 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1744 Amo-Chr7 49881841 49882708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1744 37 124 Core Cell Cycle Gene Families AT2G38620 37.234 5.00e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo07g1744 Pkinase 2.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1744 K14502 - mus:103978372 106.301