Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1738 ATGGAGCGCTACGAGATTATCAAAGATATTGGTACCGGGAACTTTGCTGTCGCCAAGTTGTTGAGAGACAAATTTACCAATGAGCTCTTTGCTGTTAAGTTCATTGAAAGAGGCTACAAGATTGATGAGCATGTCCAGAGGGAGATCATGAATCACAGGTCCCTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTTTTGACTCCAACACATCTAGCTATAGTAATGGAGTATGCTGCTGGAGGAGAACTCTTTGAGAGGATATGCAATTTCGGTAAATTTTGCGAGGATGAGGCGAGATTTTTCTTTCAGCAATTGATATCAGGAGTTAGTTATTGTCATTCGATGGTACAAAACCAAACCAATATTTTAGCAAGAATTATCTACCCTTGCAATGGACATGTATTTTTAATTGAAGGAATGTTTATGCAGCAAATCTGTCATAGAGATCTGAAACTCGAAAACACACTTCTAGACGGAAGCACCGCACCGCGAGTCAAAATTTGTGACTTTGGTTATTCAAAGTCATCCGTATTGCATTCACAACCGAAGTCTACAGTAGGAACTCCAGCTTACATCGCTCCTGAAGTCCTGACAAGGAAAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATATGTGATGTTATTTGGAACTTATCCTTTTGAAGATCCTGCGGATCCTAGAAATTTCAAGAAAACTATTGGGAGGATAGTTGGTGTTCAGTATACAATTCCTGATTGTGAACGAGTTTCCTTGGAATGTAGACATCTTCTATCAAAAATCTTTGTGGCGAATCCTGAACAGAGAATAACAATATCGGAAATCAAAAACCATCCATGGTTTTTAGTGAACTTGCCTGTAGAACTAATGGAAGGTGGAAGCTGCCTAAGCAGCGACGTGAATGATCCGTCGCAGAGTGTGGAGGAAGTACTTTCCATTCTACAAGAGGCAAGAAAGCCTCCTAATGTTCCCATGGTTGGTGACAGCCTTGTCACCGAAGGCAGCATGGACTTCGACGATCTATTGGATGCAGACGCAGATGCAGATCTTGATGATTTAGAAACAAGCGGTGAATTTGTGTGCCCTCCTCTTTGA 1116 0.4122 MERYEIIKDIGTGNFAVAKLLRDKFTNELFAVKFIERGYKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNFGKFCEDEARFFFQQLISGVSYCHSMVQNQTNILARIIYPCNGHVFLIEGMFMQQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLFGTYPFEDPADPRNFKKTIGRIVGVQYTIPDCERVSLECRHLLSKIFVANPEQRITISEIKNHPWFLVNLPVELMEGGSCLSSDVNDPSQSVEEVLSILQEARKPPNVPMVGDSLVTEGSMDFDDLLDADADADLDDLETSGEFVCPPL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1738 371 Pfam Protein kinase domain 4 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1738 371 Pfam Protein kinase domain 142 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1738 371 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 145 364 - -
Amo07g1738 371 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 118 - -
Amo07g1738 371 SUPERFAMILY Protein kinase-like (PK-like) 2 295 IPR011009 -
Amo07g1738 371 Gene3D Transferase(Phosphotransferase) domain 1 80 294 - -
Amo07g1738 371 PANTHER SERINE/THREONINE KINASE 2 118 - -
Amo07g1738 371 PANTHER SERINE/THREONINE KINASE 145 364 - -
Amo07g1738 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Amo07g1738 371 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Amo07g1738 371 SMART serkin_6 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1738 371 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Amo07g1738 371 ProSiteProfiles Protein kinase domain profile. 4 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1738 Amo-Chr7 49764701 49767731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1738 3 298 CBL-interacting serine-threonine protein kinases AT4G24400 38.033 1.07e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo07g1738 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1738 K14498 - gmx:100798091 565.074