Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1730 ATGAAAGGCAACAACCTGAGACAGAGAAGAGCGGTGAAGAGGCATGAAGAACAGCACTGTTGTGATGGAGCACGAGGAAAGTTGGCGACAGCTGCGTCTCCGATGCAGAGAAACAGAGGAGAGAGGGGGATGACGGACGAGCGGATTTATAACTTAGGCGAAACTAAATTAAATAAGCAAAGACGAGTTGCAGTAGGTATTGTAGTTCTAATAAACATCGTCATTGCAGGACCTAGCAGTGGAGCTTCCATGAATCCTGCAAGGAGTTTAGTCCCTGCCATAGTCTTAGGTGCTTACAAAAATATTTGGGTTTACATCATAGGCCCTACCCTAGGAGCAATCTTAGCAAGCATGGTATACATGTTCTCAAGGGTCCCCCAGCAAACAAAACCATAA 396 0.4571 MKGNNLRQRRAVKRHEEQHCCDGARGKLATAASPMQRNRGERGMTDERIYNLGETKLNKQRRVAVGIVVLINIVIAGPSSGASMNPARSLVPAIVLGAYKNIWVYIIGPTLGAILASMVYMFSRVPQQTKP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1730 131 PANTHER MAJOR INTRINSIC PROTEIN 60 130 - -
Amo07g1730 131 PANTHER AQUAPORIN NIP2-1 60 130 IPR034294 -
Amo07g1730 131 Gene3D Glycerol uptake facilitator protein. 43 130 IPR023271 -
Amo07g1730 131 SUPERFAMILY Aquaporin-like 62 127 IPR023271 -
Amo07g1730 131 Pfam Major intrinsic protein 62 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo07g1730 131 PRINTS Major intrinsic protein family signature 103 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo07g1730 131 PRINTS Major intrinsic protein family signature 66 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1730 Amo-Chr7 49280869 49283187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1730 63 128 Major Intrinsic Protein MIP AT5G37810 56.061 9.54e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1730 K09874 - lja:Lj0g3v0011459.1 100.523