Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1670 ATGAGTATTTCTTTGACTGTGATAACCTTCAAACTGCATGATGATCATGTAGAAGATAGTCCCAATTTGTGGGAGAAGAGGAGGGACTTATGTATTAGTGTAATCACAAGTTACTCTCCCATTATCCTTTGTACCCAGCAAGTTGCTGGAGATGATGAGGGATCACAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCGTTGAAGGAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAGTGCTCAACCATTCATTGATTGGCCTCAGAATGCTGAATCAAAATCGGAGGAAGAATGA 330 0.4182 MSISLTVITFKLHDDHVEDSPNLWEKRRDLCISVITSYSPIILCTQQVAGDDEGSQLLLLNAVEEFCYKKGSNALKEGLKGDKKDSQIWKSAQPFIDWPQNAESKSEEE* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1670 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 77 109 IPR045196 GO:0003743|GO:0006413
Amo07g1670 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 49 77 IPR045196 GO:0003743|GO:0006413
Amo07g1670 109 Gene3D Endonuclease/exonuclease/phosphatase 3 87 IPR036691 -
Amo07g1670 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 49 77 - -
Amo07g1670 109 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 77 109 - -
Amo07g1670 109 SUPERFAMILY ARM repeat 29 103 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1670 Amo-Chr7 46291639 46292517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1670 52 102 Eukaryotic Initiation Factors Gene Family AT1G77840 33.766 1.67e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1670 - - aip:107619007 100.523