Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1640 TGCTTGCCTTTTACCTATGCAGAGCACATTGGCAACAAAGCCCTTTGTTCCCTTATGAGTCTCATTGCAAAGTTAGATTTCTCAGCCCCTATTTTCTCTAAAAGATTTCAGAAGTTCCTTGGGATAGGGTACAGTATGGTGTTTGAGTTGTTGCCTCGTGACAAGATGTTCTTTTTTAAAGATGTGATCCTCTTTGATGATGCTTGCACTCTTTGCGATTTCAGGTTTCCCTGGGAGAAGTTGGGGTTGTTGTATATGGCAGAAAGTTCAATATTTGGCATGAATGCTGAATACATTGAGGTTATTGGTATATGTTTAGCTTTCCCTTTTGTCTTGCTTGAGGAAGGCCAAGTGAGAGCTGGAAGAATTGAGGGACTCTTAAGTGATCTGAAATTGATATTTTTCGATTTTAGGTTAGGAAGGTTTGTTGAAGGAGATGTGGATTCTTGGCATGATATGTGTAGAAAATTAAGGGTGTTTTATGATTTAAATAGTCAGAAAGGGGAGTTAGACGAACTAATCGAAAGGCATAAAAGTATATTTATCGATTATACAGAAGAAGAATTAGTTAATAAAGTGGATTATTTCTGTAGATTTAGTGTGAAGAAGGAAGAAGTGGCTCAGTTGATTTTACAATGCCCGAAAATATTGAAACTGGATCTGGAGAAACCGGTATTCAATGTAATGAAGCTGTTGACACACTTTGGCCTTAGCACTGAAGATATGAAGGAAGTAAGTCGAAGTTATGGTCATGTTATGGGAACAAATAAAATGGCTAATCTTCCTAATGTAATGAAGGCTTTAGGCTTACAAGAGTGGTTCTTGAAGAAAATCAAGGATGGAAATCATATGTTGTTAGTAGATTATATCAGAAGATATCCTAAAGAAGAACAGGATCTAGATTATCAAGAAGGTTTAAGGATAATTAGAATTTTAAAAACATGGGTTCATAATATCGGTAAATTAAATTTCTTGCTTGGCTTGGGCTTTGGAGAAAATACTTTATTCGATTGTCTCATACGTTCAAAGATTGAATTCTCCCGGCTCTATATGATGGTAAGAACAACCCCAAGGATTCTTAATCAAAATTCGGAAACCATTGAGCAAAAGGTGAATTTTTTCCACCAGGAAATGATAACTACTTTAAATCATGTGGAAACACAACTATCTTCTTTCCTTTGGATTGGAGCTCCTGAAAACATAACTTTTGGAAGAGAGAATGAAAGAGGTTCTGAATCATAA 1242 0.3591 CLPFTYAEHIGNKALCSLMSLIAKLDFSAPIFSKRFQKFLGIGYSMVFELLPRDKMFFFKDVILFDDACTLCDFRFPWEKLGLLYMAESSIFGMNAEYIEVIGICLAFPFVLLEEGQVRAGRIEGLLSDLKLIFFDFRLGRFVEGDVDSWHDMCRKLRVFYDLNSQKGELDELIERHKSIFIDYTEEELVNKVDYFCRFSVKKEEVAQLILQCPKILKLDLEKPVFNVMKLLTHFGLSTEDMKEVSRSYGHVMGTNKMANLPNVMKALGLQEWFLKKIKDGNHMLLVDYIRRYPKEEQDLDYQEGLRIIRILKTWVHNIGKLNFLLGLGFGENTLFDCLIRSKIEFSRLYMMVRTTPRILNQNSETIEQKVNFFHQEMITTLNHVETQLSSFLWIGAPENITFGRENERGSES* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1640 413 Gene3D Transcription termination factor 3, mitochondrial 146 393 IPR038538 -
Amo07g1640 413 PANTHER CGI-12 PROTEIN-RELATED 1 387 IPR003690 GO:0003690|GO:0006355
Amo07g1640 413 Pfam mTERF 156 267 IPR003690 GO:0003690|GO:0006355
Amo07g1640 413 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 1 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1640 Amo-Chr7 45035935 45037314 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo07g1640 mTERF 6.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1640 - - adu:107486036 661.759