Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1619 ATGAAGAAATTCTTTCTTTACACAAATGCTCATAATGCTCGAGAGAGCATGATGAATCAGATGATGTATTCCGATATAAATTCTCGAATTGGGAGTTGTATGCCATTATCTTCTATGCGAATTGGAACTATCATTCACAATATRGAATTGAACCCGGGGCAAGGTGGCAAGCTGGTTAGAGCTGCTGGAACTTGTGCAAAAATCCTGAAAGAACCCACATCAAAATACTGTCTTATCCAGCTCCCCTCGGGTGTTAAAAAAATGATTGATTCTCGTTGCAGGGCCACCGTTGGTACTGTCTCAAATCCAAGCCACGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCYGTGGCTTGGCCGMAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTAGACCATCCTCATGGTGGAGGAGAGGGTAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGKAGGAAGTAG 528 0.4621 MKKFFLYTNAHNARESMMNQMMYSDINSRIGSCMPLSSMRIGTIIHNXELNPGQGGKLVRAAGTCAKILKEPTSKYCLIQLPSGVKKMIDSRCRATVGTVSNPSHGDKKLRKAGQSXWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1619 175 Coils Coil 172 175 - -
Amo07g1619 175 MobiDBLite consensus disorder prediction 129 175 - -
Amo07g1619 175 Gene3D - 19 100 IPR014722 -
Amo07g1619 175 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 18 175 - -
Amo07g1619 175 SMART Ribosomal_L2_C_2 28 161 IPR022669 GO:0003735|GO:0005840|GO:0006412
Amo07g1619 175 PANTHER RIBOSOMAL PROTEIN L2 18 175 IPR002171 GO:0003735|GO:0005840|GO:0006412
Amo07g1619 175 ProSitePatterns Ribosomal protein L2 signature. 123 134 IPR022671 GO:0003735|GO:0005840|GO:0006412
Amo07g1619 175 SUPERFAMILY Translation proteins SH3-like domain 30 164 IPR008991 -
Amo07g1619 175 Pfam Ribosomal Proteins L2, C-terminal domain 30 159 IPR022669 GO:0003735|GO:0005840|GO:0006412
Amo07g1619 175 Gene3D Ribosomal protein L2, domain 3 101 175 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1619 Amo-Chr7 44470366 44471604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1619 13 140 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.066 4.86e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1619 - - lang:109347761 292.737