Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1617 ATGGTTTTGTTTGCTCGCTCTGTTGGCTCTTGGATACATAAACTCACAGCTAATGGACAAGACTTATTCACATCTTACGATGAGGTGTACGATAGCTTTGATGCTATGGTTTCCAAGAGAATCTCCTCAGAGGCATTTATGCTTATGCTATCAGCTATTCAGCAAAGGGGAATAGTCCCATTCTGCAAGGGACTTGATGTTATTCAACAGGCCCAATCCGGAACTGGAAAAACTGCAACTTTTTGCTCTGGAATCCTACAACAACTTGACTACAGCCTGACTGAATGTCAGGCCTTGGTTTTAGCTCCAACCCATGAGCTTGCTCAGCAGATTGAGAAGGTTATGCGGGTGCTTGGAGATTATCTAGGTGTGAAGGTTCATGCTTGTGTGGGAGGCACCAGTGTTCGTCAAGACCAACGCATTCTAGCCAGCGGTATTCATGTTGTTGTTGGTACTCCTGGACGTGTCTTTGATATGCTGCGCAGACAGTCACTTCAGCCGGATCACATTAAAATGTTTGTGTTGGATGAGGATGATAAAATGCTTTCAAGGGGTTTTAAAGACCATGTTGGAGATTTCTCTGCCACAATGCCCCCTGAGGCCCTTGAAATTACTAGAAAGTTTATGAACAAACCTGTGAGGATCCTTGTGAAGCGCAACGAGCTCTCTTTGGAGGGTATAAAGCAGTTTTATGTCAATTGTGAGAGAGAAGAATGGAAGCTTGACACACATTGTGATCTGTACGAGACATTAGCTATTAACCAGTCATTTTTGTCAACACCAGAAAGAAGGTAA 795 0.4365 MVLFARSVGSWIHKLTANGQDLFTSYDEVYDSFDAMVSKRISSEAFMLMLSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTHELAQQIEKVMRVLGDYLGVKVHACVGGTSVRQDQRILASGIHVVVGTPGRVFDMLRRQSLQPDHIKMFVLDEDDKMLSRGFKDHVGDFSATMPPEALEITRKFMNKPVRILVKRNELSLEGIKQFYVNCEREEWKLDTHCDLYETLAINQSFLSTPERR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1617 264 Gene3D - 20 225 IPR027417 -
Amo07g1617 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 218 IPR027417 -
Amo07g1617 264 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 58 215 IPR014001 -
Amo07g1617 264 PANTHER EUKARYOTIC INITIATION FACTOR 4A-8-LIKE 16 263 - -
Amo07g1617 264 PANTHER RNA HELICASE 16 263 - -
Amo07g1617 264 Pfam DEAD/DEAH box helicase 52 197 IPR011545 GO:0003676|GO:0005524
Amo07g1617 264 SMART ultradead3 46 230 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1617 Amo-Chr7 44432678 44434119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1617 5 264 Eukaryotic Initiation Factors Gene Family AT3G13920 70.863 2.66e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1617 K03257 - gmx:112999960 399.438