Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1589 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGCGGCYAGATCCACCACCGCCCCAACGACAAWAAGATCTCCTACGTCGGCGGCCACAACAAGCTKTACTACGTTAACCGTGGAATCGACTTCACRGCCATGCTCYCWYAACTCTCCGCCCTCTTTGACGCCGCCGGTGACATCCACTTCAAGTATCAGCTCCCCGGCGATGACTTTGACGCCCTAATATCCGTCACCAGTGACAACGGCCTAAACAGCCTGATGCTTGAGTATGATAAGCTCTAA 282 0.5177 MENYDVKFLCSYGGXIHHRPNDXKISYVGGHNKLYYVNRGIDFTAMLXXLSALFDAAGDIHFKYQLPGDDFDALISVTSDNGLNSLMLEYDKL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1589 93 PANTHER OS05G0427100 PROTEIN-RELATED 5 93 - -
Amo07g1589 93 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 93 - -
Amo07g1589 93 SMART PB1_new 20 93 IPR000270 GO:0005515
Amo07g1589 93 SUPERFAMILY CAD & PB1 domains 22 92 - -
Amo07g1589 93 Pfam PB1 domain 21 92 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1589 Amo-Chr7 43800653 43800934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1589 2 93 MAP Kinase Kinase Kinase AT5G57610 44.565 7.60e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1589 - - ahf:112709080 167.162