Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1576 ATGACATCGAGTAGCAGCAAGGCGGAAGACCCGTGGAAATGGAACGTGGCGATGGTCGAGCTGTTTTCGCAGGCGCAAACTGATTATGCAGACGAGGGGGGAGCATTGTTTGACCTGGGCACTGAYSGTGAAGTTGTGGTTGGAGATTTGGASTGCRATAATGRGGGGGCGTCGGTTGGATATRTAGATATGGGTGGGCTTAGATCGGAAGACGTTCTTCTAATGGAATTTAACACGCCTGAAGAGGTAAGAGGTTTCTATAATAACTATAGCCGCATTAAGGGGTTTGCAACAAGACAAGGAAAGAAGGTAAGAAATATTGTCGGAGACATTGTGAGGTATACTTTTGTTTGCAACAGAGAGGGGTTCAGAGAGAAGAAATGGTTGGAGAAGACTGATATAAAGAGGGAGCATAAAGTGGTAACTCGCTGTGGTTGTGTGGCCGAGATGAGGATTAAGAGGAAAGACGGTTGCGGAAAGTGGTATGTCTCGCGATTTATCGATGAGCACAATCATGAGCTTCTGCCGGGAAAGTTTGTTGATTTCTTGAGATCACACAGGAAAATTTCAGAGGTTGAGATTGCACATCTAACCAGCATGCGGGATATAGGAATTAGTATTCCGAAGATCTATGAATCGTTTGCAGCCCAGCTTGGTGGCTTCAACATGGTCACGTTTACGAAGCAAGATATGTATAATGAGGTGAGGAGACAAAGAGCATTGCAGGATAGAGATGTAAATGCGGCCATTTGGTTCCTAGATGGTGTTGGTCGTGTTGATGGGAAGATGTTTTGGAGGCATAGATTGGGTCCTGGACAACACTTGTGCGACTTGTTTTGGAGTGATGGGCGCAGTCAGTATGATTATGGGGTATTTGGTGATGTGCTGGCATTCGATGCGATCTACGGGAGGAACAAATATAATCTACCCGTAGTGGTGTTTTCCGGGGTTAACCATCACAACCAGACGTGCGTATTTGCCACGGCTTTAGTGTCATGCGAGTCACAGGAATCTTACGTATGGGTGCTTGAACAATTTTTGGAGTGCATGGGGGGTGTAGCACCGAAGTCGGTAATCACCGACGGGGATTAA 1092 0.4606 MTSSSSKAEDPWKWNVAMVELFSQAQTDYADEGGALFDLGTDXEVVVGDLXCXNXGASVGYXDMGGLRSEDVLLMEFNTPEEVRGFYNNYSRIKGFATRQGKKVRNIVGDIVRYTFVCNREGFREKKWLEKTDIKREHKVVTRCGCVAEMRIKRKDGCGKWYVSRFIDEHNHELLPGKFVDFLRSHRKISEVEIAHLTSMRDIGISIPKIYESFAAQLGGFNMVTFTKQDMYNEVRRQRALQDRDVNAAIWFLDGVGRVDGKMFWRHRLGPGQHLCDLFWSDGRSQYDYGVFGDVLAFDAIYGRNKYNLPVVVFSGVNHHNQTCVFATALVSCESQESYVWVLEQFLECMGGVAPKSVITDGD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1576 363 Pfam MULE transposase domain 295 363 IPR018289 -
Amo07g1576 363 Pfam FAR1 DNA-binding domain 86 176 IPR004330 -
Amo07g1576 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 363 IPR031052 GO:0006355
Amo07g1576 363 PANTHER OS02G0262500 PROTEIN 71 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1576 Amo-Chr7 43141052 43143800 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g1576 FAR1 3.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1576 - - aip:107620408 533.102