Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1561 ATGGTTTCATCATCATCTCCCTCTGTAGTGTTTACAGTGAAATGGTGCGAACCAGAGCTAGTGTCTCCGGCCTCGCCCACTCCCCATGAAGTTAAACAACTATCAGACATAGATGATCAAGAAGGGCTACGTTACCAACTTCCAATCATAAATATATATCGTCACAATCCATCAATAGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCGTTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTTGATTGCACTGCAGAGGGTGTATTGTTCATTGAGGCCGATGCTGACGTGCCACTTCATCAACTTGGTGAAGCTCTTCAACCTCCATTCCCTTGCTATAAGGAATTGCTTTACAATGTTCCTGGCTCAGATGGAATTGTCGGCTGTCCCCTTTTACTCTTACAGGTCACACGCTTTAAGTGCGGCGGTTTTTCTGTCGGCATACGGGTGAACCACACGATGGTAGATGCAACTGGTATTGTGCAATTCATGAACGCCATGGCTGAAATCTCTCGAGGCTCTCATCAACCTTCCATTCTACCCGTTTGGTGTAGGGAGCTTCTAACTGCAAGAGACCCGCCACGCATCACATGCAACCATCGAGAATTTGAGGAAGCAAAAGATATTAAGGAATGGGAAACCATTATTGATGACAAAAACATGATTAAACGAAATTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGCTGCTTGACTCTAAATCAATCCGCTGAATACACTGGATTTGAGCTTATCACTGCATGCCTCTGGTATTGTCTTGTAAAAGCATTGCAACTACCACCAGAAAAAGAAGTTCGAATGTATTGTGTCGTCAATGCTCGTGCTAGATTTAACCCTCCCATGCCAATCGGTTATTATGGAAACGTTATATCGTTTCCGGCGGCGGTCTCCACCGTAGAGAAGCTATGTGAAAATCCATTTGAATATATTGTAAAGTTAATAAAAAAAGCGAAAGCCGAGCCAACAGAAGAATACATGCATTCTTTAGCAGATTTAATGGTGATTAAGGGACGACCTTTGACTACAAGAGCATGGTCTTTTCTTGTGTCAAAGGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGTATGGTGGGATAAGTGGCGACAAGATTTTTGGAGAACTTACTCTCATGGATTGTGAGAATGCAAATGGAGAAGAAAGTGTTGTAGTTCCACTTTACTTGCCTGCCAATGCTATGAAGAGGTTTGCAAAAGAAATGGATGATTTGCTTCTGATCCCAAATCAGAATTGCAAATAA 1347 0.4306 MVSSSSPSVVFTVKWCEPELVSPASPTPHEVKQLSDIDDQEGLRYQLPIINIYRHNPSIEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADVPLHQLGEALQPPFPCYKELLYNVPGSDGIVGCPLLLLQVTRFKCGGFSVGIRVNHTMVDATGIVQFMNAMAEISRGSHQPSILPVWCRELLTARDPPRITCNHREFEEAKDIKEWETIIDDKNMIKRNFFFGPTEIASLRCLTLNQSAEYTGFELITACLWYCLVKALQLPPEKEVRMYCVVNARARFNPPMPIGYYGNVISFPAAVSTVEKLCENPFEYIVKLIKKAKAEPTEEYMHSLADLMVIKGRPLTTRAWSFLVSKVTRIGFRKVDFGWGNAVYGGISGDKIFGELTLMDCENANGEESVVVPLYLPANAMKRFAKEMDDLLLIPNQNCK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1561 448 PANTHER ALCOHOL ACYLTRANSFERASE 13 440 - -
Amo07g1561 448 Gene3D - 12 217 IPR023213 -
Amo07g1561 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 440 - -
Amo07g1561 448 Gene3D - 218 436 IPR023213 -
Amo07g1561 448 Pfam Transferase family 13 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1561 Amo-Chr7 42838854 42840638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1561 20 434 Monolignol Biosynthesis Gene Families AT5G48930 28.806 3.06e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1561 K19861 - gmx:100792864 548.51