Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1520 ATGACCACCGTACCGGGACAGCTGGTTTGGGAGATCGTGAAGAAGAACAACTGTTTCTTGGTTAAGGAGTTTGGAAGGGGCACTCAGAGCGTTGAGTTCAGCAGAGAAGCCAACAATCTCTACAACCTTAACTCCTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACTATTCAGCCTGCTGGAAAAGATCAGGCTGTGTTGCTTGCTACAACAAAGACAAAGAAGCAAAACAAGCCGGCTGCATTGCTTCATAAATCTATCATGAAGAAGGAGTTCCCTAGAATGGCAAAAGCAGTGAAAAAACAGGTTGCAGCTAACTACTACAGGCCTGATCTCACCAAGGCAGCTCTTGCAAGGTTGAGTGCTGTCAATAGGAGCCTCAGGGTTGCAAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCTGTTAAGGTCCATGGCAGGAAGTGA 453 0.4614 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREANNLYNLNSFKYSGLANKKTVTIQPAGKDQAVLLATTKTKKQNKPAALLHKSIMKKEFPRMAKAVKKQVAANYYRPDLTKAALARLSAVNRSLRVAKSGVKKRNRQAVKVHGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1520 150 Gene3D - 6 133 - -
Amo07g1520 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Amo07g1520 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Amo07g1520 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1520 Amo-Chr7 41548197 41549791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1520 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 5.96e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1520 K02903 - gmx:100499921 263.848