Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1512 ATGCATCATCAAAATAACAGTTGTTATATTATTGTTGTTGTAACTTTAATTGGGCACAAACTGTATAGCAACCTCTACCTTGAACTAGAAAAGGTGCTTCCATTCCAAACCGAGCAAGGTGTTACATACGAGGAAGTTCTGAGAATTACCAACAACTTTGCACGGGTTCTTGGGAAAGGAGGATTTGGAACTGTATTTCATAGCTGCTTAGGTAACACTCAAGTAGCTGTTAAGATGCTCTCCCCTTCAGGCTTCAGCTCAAGGGAACCAGCAATTTCAGGCAGAGGTACATACAACTACAAACAATCCATTGAAAATAGGCACTTACTTGCGGAACTCCTTGCTAAAGTTCACCACAAGTGCTTGACTGCTCTAATTGGATACTGTGAAGGGAACAATGTGGCCCTCATCCATGAGTGTATGTCAAATGGAGACTTATCAGGGTTGCCAATTGTGCACAGAGATATCAAACCTCAAACATGCACTCTAAGTTGGGTGATTTTGAATTGTCAAAGATCTTTTCTGGTGAAGAAGACACACATGTATCCACACTTTGGTGTTGTTCTTCATGAGATCATCACTGGCGAACCTGCCATATCCAAAACTGAGGAAAGAACTCACATAATCAAATGGATAATTCTGCCCTGCTTCAGTCAGGAAGGCCTTAGAGACTGCAATGGCGGGGGAAAAATGATAGGAATTTTCCTGCTTTTAGTATTTCAACTTCTGTGGAATCTTCCTATCATTGTTCATGCCCAGAATCAATCAGGCTTTGTTAGCATTGATTGTGGACTTGTGGATGAAGCAAGTTACAAAGATGAAACAACTTCCATATATTACATTTCAGATGCCAGCATCATAGACACTGGTGAATGCCACAACATATCACCCAAATATAAGGCCTCTTCACTTGCCAAACAGTTCTGGAATGTTAGAAGTTTCCCAGAAAGAATCAGAAACTGCTACACCCTTAAGGTCCCTCAAGGAAGAAGCAGCAAGTATCTACTAAGGGCAAGGTTCATGTATGGAAACTATGATGGTAAAGATTCACTTCCTCAATTTGATATCTATCTTGGAACCAAATGGTGGCAATCTGTAGTGTTGAAGGATCCAACCAGTGTAATAACCAAGGAAATCATCTTTGTTGCTGCCTCGGATTATGTTCATGTTTGCCTAGTTAACACCAACAAGGGTACACCTTTCATATCAGCTTTGGAGATTAGAGTTCTTGACAGTGATGCCTATCTTATTAACTCCATCGAGCTTCTCGCCCGGTATGACATAGGATTACAGGAAGATAAAACAGTCAGATACCCAGATGATGTCCATGATAGAATATGGACACCTTACAATTCAAAAGATTGGAAACAGATAAACACTTCTCTTGCTATAGACAAAGAATCATCTTCATACAACTTTTTACCATTACCAGCCTCTACTGTGATGGAAACAGCAGCAATTCCAACAAACAACAATGCTAATATAGAATTTAACTTCTATCCCAAGCATAATGCCTCTGCATACTATGTGTACTTCTTCGTTGCCGAAATCCAGAAACTTGAAGCAAATCAATTTAGAGACTTCAACTTTTTTGTGAATGGGGATCTTCTTAATGGTTCTCCAGTGAATCTTAAGTACCTGCAGAGCGTGTATTACATATCAATTTTGGAGAAACCACGGTTGGAACTTTGGATTAACAAAACAACCAGATCAACACTTCCCCCTCTTTTCAGTGCCATTGAGATATATATGACTAAGAATTTCTCACAATCACAAACAGACCAAACTGATGCTTCTGCTATCATGAATGTGAAGTTAAATTATGGGATAAAAAGAAATTGGCAAGGAGATCCATGCATTCCACTAAGTTACATGTGGGATGGTGTTAATTGCAGCTATGCTGGTTCTTCTCCAAGGATCATATACTTGAACTTATCTTCCAGTGGTTTAACTGGAAATATAACATCAGCCATATCCAATTTGAAGTCAATAGAATATTTGGATTTATCAAACAACAGTTTGACAGGATCAGTGCCTTATTTCTTATCTCAACTTCACTCCTTGAGAGTTCTGAACATGGAAGGGAATCAGCTAACAGGAGCAGTTCCAATGCAACTCAGAGAGAATTCAAATAATGGCATGCTCAAAACCAGCAATAGTAATAAAGTTGTGGTTCCATTGGTGGCATCACTAGGTGGAGCTTTTGTGATTCTAGCAACAGCAATCACTTCTTTCCTCATATTCAAAAGACATAGAGTAGCCTCTGAAATGGGGAATCTGAGAGCATATTCAAGAATAAAGATGGAGTTAGAGTCAAATAAACAGCAATTTAGCTATGCTGAAGTCCAAAAAATTACCAAAAATTTTAAAAGGGTTGTGGGAAAAGGAGCATCTGGAACAGTGTATCATGGCTATGTAGGTGATACTGAAGTTGCTGTCAAAATGCTGTCTCCTTCAGACTCAAACTCAGCCCAAGCATATCTACAATTTCAGGCAGAGGCAAAACTTCTGGCTGTAGCTCATCATAAATGCTTGACACCTCTTATAGGATATTGTGATGATGGCACAAACATGGCTCTCATCTATGAATACATGCCTAATGGAGACTTAGCCTACCACTTATCAGGATTGGAGTATCTACATGAAGGTTGTTGTCCAGGAGTTGTTCACAGAGATATAAAGTCAAAGAACATATTACTAACTGAAAAATTTAGAGGAAAATTGGCTGATTTTGGTTTGGCCAAGATCTACCCTAATGAAAATGATACACACATGTGCACTGTGGTTGCTGGCACCCCCGGATACCTTGATCCGCTGTACCACAGATCAAGCAAGTTGAGTGAAAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGCTTGAGATAATTACAGGGCATCCAGCCATAACCAAAACAGAAGAGAAAGTTCACATAATTAGATTGGTTGGATCAATGCTTAGTGAAAGGGAGGTGAATGATATTGTGGATCCAAGATTAGAAGGAAACTTTGATGTTGACTCTGCAAAGAAAGTCTTGGATATTGCAATGGCTTGTGTAGCAGCTGCTTCCATTAACAGGCCAGCAATGAGTTATGTTGTTGCTCAACTCAAAAAATGTTTGCCAGCTGATGATGATAATGTTGAAAATAGGATTACTGTAGTTAATCATCTGTTGCATGATTCTGACATTCATCAAAGTTTACCGGCCAGCATTATTGATATAATTAGTGGACAGAGCTCCCTAGAAAGGTAG 3252 0.3918 MHHQNNSCYIIVVVTLIGHKLYSNLYLELEKVLPFQTEQGVTYEEVLRITNNFARVLGKGGFGTVFHSCLGNTQVAVKMLSPSGFSSREPAISGRGTYNYKQSIENRHLLAELLAKVHHKCLTALIGYCEGNNVALIHECMSNGDLSGLPIVHRDIKPQTCTLSWVILNCQRSFLVKKTHMYPHFGVVLHEIITGEPAISKTEERTHIIKWIILPCFSQEGLRDCNGGGKMIGIFLLLVFQLLWNLPIIVHAQNQSGFVSIDCGLVDEASYKDETTSIYYISDASIIDTGECHNISPKYKASSLAKQFWNVRSFPERIRNCYTLKVPQGRSSKYLLRARFMYGNYDGKDSLPQFDIYLGTKWWQSVVLKDPTSVITKEIIFVAASDYVHVCLVNTNKGTPFISALEIRVLDSDAYLINSIELLARYDIGLQEDKTVRYPDDVHDRIWTPYNSKDWKQINTSLAIDKESSSYNFLPLPASTVMETAAIPTNNNANIEFNFYPKHNASAYYVYFFVAEIQKLEANQFRDFNFFVNGDLLNGSPVNLKYLQSVYYISILEKPRLELWINKTTRSTLPPLFSAIEIYMTKNFSQSQTDQTDASAIMNVKLNYGIKRNWQGDPCIPLSYMWDGVNCSYAGSSPRIIYLNLSSSGLTGNITSAISNLKSIEYLDLSNNSLTGSVPYFLSQLHSLRVLNMEGNQLTGAVPMQLRENSNNGMLKTSNSNKVVVPLVASLGGAFVILATAITSFLIFKRHRVASEMGNLRAYSRIKMELESNKQQFSYAEVQKITKNFKRVVGKGASGTVYHGYVGDTEVAVKMLSPSDSNSAQAYLQFQAEAKLLAVAHHKCLTPLIGYCDDGTNMALIYEYMPNGDLAYHLSGLEYLHEGCCPGVVHRDIKSKNILLTEKFRGKLADFGLAKIYPNENDTHMCTVVAGTPGYLDPLYHRSSKLSEKSDVYSFGVVLLEIITGHPAITKTEEKVHIIRLVGSMLSEREVNDIVDPRLEGNFDVDSAKKVLDIAMACVAAASINRPAMSYVVAQLKKCLPADDDNVENRITVVNHLLHDSDIHQSLPASIIDIISGQSSLER* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1512 1083 Gene3D Transferase(Phosphotransferase) domain 1 865 1060 - -
Amo07g1512 1083 Gene3D Ribonuclease Inhibitor 598 719 IPR032675 -
Amo07g1512 1083 ProSiteProfiles Protein kinase domain profile. 787 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1512 1083 SUPERFAMILY L domain-like 623 708 - -
Amo07g1512 1083 ProSitePatterns Protein kinases ATP-binding region signature. 793 814 IPR017441 GO:0005524
Amo07g1512 1083 SMART serkin_6 787 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1512 1083 Pfam Protein kinase domain 874 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g1512 1083 Pfam Leucine rich repeat 642 698 IPR001611 GO:0005515
Amo07g1512 1083 PANTHER TYROSINE KINASE FAMILY PROTEIN 176 212 - -
Amo07g1512 1083 PANTHER TYROSINE KINASE FAMILY PROTEIN 240 1076 - -
Amo07g1512 1083 PANTHER TYROSINE KINASE FAMILY PROTEIN 38 147 - -
Amo07g1512 1083 Gene3D Phosphorylase Kinase; domain 1 39 139 - -
Amo07g1512 1083 Gene3D Phosphorylase Kinase; domain 1 769 864 - -
Amo07g1512 1083 SUPERFAMILY Protein kinase-like (PK-like) 37 208 IPR011009 -
Amo07g1512 1083 Pfam Malectin-like domain 261 584 IPR024788 -
Amo07g1512 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Amo07g1512 1083 SUPERFAMILY Protein kinase-like (PK-like) 769 1036 IPR011009 -
Amo07g1512 1083 PANTHER OS07G0107800 PROTEIN-RELATED 176 212 - -
Amo07g1512 1083 PANTHER OS07G0107800 PROTEIN-RELATED 240 1076 - -
Amo07g1512 1083 PANTHER OS07G0107800 PROTEIN-RELATED 38 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1512 Amo-Chr7 41485989 41492072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1512 37 214 Receptor kinase-like Gene Family AT2G19210 32.800 5.14e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo07g1512 Malectin_like 7.2e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1512 - - pvu:PHAVU_005G162000g 1093.18