Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1500 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGGTTATTGGGATTGAAGAAGGACAATTGTGCTTCAATGGCTGCTTCTACTGACAAGAAGGAGAAGAAACGTTGGAGTTTTGCAAAGTCTGCCAAAGATGGAGATTTGACTCAAAATGCTTCTACAAATTATGGAGTCAGGGGCTCTGACTCTGACTCTGCTGAAAAAGGGAATGAGCAGAACATGGGTGCCATAGCCGTGGCAGTAAGCAGGGAGAAGTGGGCTGCATTGAAGATCCAATCTTATTTCAGAGGTTACTTGGCTAGGAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTAGTTAGAGGCTATCTTGTTAGGAAAAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAGGTTGCCGCCAGAGCTCGCCGTTCGAATAGTTTTCGGCCTCAAACTCCTGGAAGAAGATATGTGCAATGGTATGATGAAACAAGAAGTGAGTTCCATAGTAAGAGGCTACTACCAACAAGCAAATCCTATGAAACATCCTTAAATATGAAAGGATTTGATGAGAGCCCCAAGAATGTTGAAATTGATACATACAGGCCACAATCAAGATCAAGGAGAATCACAACAACTACTATGTCTGAGACTCAARAAGACCACCTTCACTATCAAGCAATCTCAGTTCTTGAATGCAGGCATCCTCCTCAGCATTTGGAATGGTACTCGAACACGGATGAATGTGAGATCGCRACAGCTCGCAGCACGCCTCGTCTGRCGAATGCTCCGGCTACACCRGTGAAGAGTGTTTGTGGAGAWTCCTTTAGGCCTTACTGCAATTCCCCTAACTACATGGCCAATACTCAGTCATATAAGGCAAAGGTTAGGTCTCATAGTGCTCCAAAGCAAAGGCCTGAGCCTAAGAAGAGGTTCTTACTCACTGAAATAATGGCAGCAAGAAATAGTACTAGTGGTGTTAGAATGCATTGGTCATCCAAATCACACTCTCAACATTATTGCAGTTTTGACAGACTTGAGAGGAAACTGAAATAG 1056 0.4384 MGKASRWLKGLLGLKKDNCASMAASTDKKEKKRWSFAKSAKDGDLTQNASTNYGVRGSDSDSAEKGNEQNMGAIAVAVSREKWAALKIQSYFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQVAARARRSNSFRPQTPGRRYVQWYDETRSEFHSKRLLPTSKSYETSLNMKGFDESPKNVEIDTYRPQSRSRRITTTTMSETQXDHLHYQAISVLECRHPPQHLEWYSNTDECEIATARSTPRLXNAPATPVKSVCGXSFRPYCNSPNYMANTQSYKAKVRSHSAPKQRPEPKKRFLLTEIMAARNSTSGVRMHWSSKSHSQHYCSFDRLERKLK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1500 351 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 79 333 - -
Amo07g1500 351 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 78 - -
Amo07g1500 351 Pfam IQ calmodulin-binding motif 108 122 IPR000048 GO:0005515
Amo07g1500 351 Pfam IQ calmodulin-binding motif 83 102 IPR000048 GO:0005515
Amo07g1500 351 SMART iq_5 103 124 IPR000048 GO:0005515
Amo07g1500 351 SMART iq_5 80 102 IPR000048 GO:0005515
Amo07g1500 351 MobiDBLite consensus disorder prediction 35 66 - -
Amo07g1500 351 Pfam Protein of unknown function (DUF4005) 256 325 IPR025064 -
Amo07g1500 351 PANTHER IQ-DOMAIN 5-RELATED 79 333 - -
Amo07g1500 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 123 IPR027417 -
Amo07g1500 351 PANTHER IQ-DOMAIN 5-RELATED 1 78 - -
Amo07g1500 351 MobiDBLite consensus disorder prediction 41 58 - -
Amo07g1500 351 Gene3D - 81 123 - -
Amo07g1500 351 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
Amo07g1500 351 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1500 Amo-Chr7 41349243 41350503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g1500 1 329 IQD Protein Family AT3G16490 43.085 2.39e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1500 - - gmx:100797686 340.887